Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1165713	1165745	33	2 [1]	[0] 3	ldtC	L,D‑transpeptidase LdtC

TGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGTAAAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAA  >  NZ_CP009273/1165746‑1165835 |                                                                                          tGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGaa                                                    <  1:159767/40‑1 (MQ=255) tGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGaa                                                    >  2:159767/1‑40 (MQ=255) tGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGTAAAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCaaaa  >  2:24282/1‑90 (MQ=255) |                                                                                          TGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGTAAAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAA  >  NZ_CP009273/1165746‑1165835

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑