Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1342848	1342857	10	2 [0]	[0] 2	rnb	exoribonuclease II

TGGATGATCAGGAACGATGGCCAGACGGTCATTTTTGCCCTGAACCTTACCCACGAAACGAGTCAGGAACGGTTCAACCAGTTCTTCTGG  >  NZ_CP009273/1342858‑1342947 |                                                                                          tGGATGATCAGGAACGATGGCCAGACGGTCATTTTTGCCCTGAACCTTACCCACGAAACGAGTCAGGAACGGTTCAACCAGTTCTTCTgg  >  1:330955/1‑90 (MQ=255) tGGATGATCAGGAACGATGGCCAGACGGTCATTTTTGCCCTGAACCTTACCCACGAAACGAGTCAGGAACGGTTCAACCAGTTCTTCTgg  >  2:217770/1‑90 (MQ=255) |                                                                                          TGGATGATCAGGAACGATGGCCAGACGGTCATTTTTGCCCTGAACCTTACCCACGAAACGAGTCAGGAACGGTTCAACCAGTTCTTCTGG  >  NZ_CP009273/1342858‑1342947

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑