| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 1,575,825 | A→T | D319E (GAT→GAA) | ydeN ← | sulfatase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 1,575,825 | 0 | A | T | 100.0% | 62.8 / NA | 18 | D319E (GAT→GAA) | ydeN | sulfatase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base T (13/5); total (13/5) | |||||||||||
GCACCATTATCGGAGGTAAAGAGAATAATTGTATTGTCATACTGTCCGTTTTTCTTCAGTTGTTCGAGAATGCGTTTTACACCCTGATCAACAGAATAAACGGAAGCGTAGTAGTTATCTGCTGTTTGACTACCGGTATTAAATTGCTTCTGATATTGATCCGGTGCAGGATT > NZ_CP009273/1575739‑1575911 | gCACCATTATCGGAGGTAAAGAGAATAATTGTATTGTCATACTGTCCGTTTTTCTTCAGTTGTTCGAGAATGCGTTTTACACCCTGTTCa > 1:56374/1‑90 (MQ=255) ggTAAAGAGAATAATTGTATTGTCATACTGTCCGTTTTTCTTCAGTTGTTCGAGAATGCGTTTTACACCCTGTTCAACAGAATAAACGGa < 2:313842/90‑1 (MQ=255) gTAAAGAGAATAATTGTATTGTCATACTGTCCGTTTTTCTTCAGTTGTTCGAGAATGCGTTTTACACCCTGTTCAACAGAATAAACGGaa < 1:206318/90‑1 (MQ=255) gaATAATTGTATTGTCATACTGTCCGTTTTTCTTCAGTTGTTCGAGAATGCGTTTTACACCCTGTTCAACAGAATAAACGGAAGCgtagt < 1:60352/90‑1 (MQ=255) gtCATACTGTCCGTTTTTCTTCAGTTGTTCGAGAATGCGTTTTACACCCTGTTCAACAGAATAAACGGAAGCGTAGTAGTTATCTGCTGt > 2:240882/1‑90 (MQ=255) gtCATACTGTCCGTTTTTCTTCAGTTGTTCGAGAATGCGTTTTACACCCTGTTCAACAGAATAAACGGAAGCGTAGTAGTTATCTGCTGt > 2:151421/1‑90 (MQ=255) cATACTGTCCGTTTTTCTTCAGTTGTTCGAGAATGCGTTTTACACCCTGTTCAACAGAATAAACGGAAGCGTAGTAGTTATCTGCTGttt > 1:254521/1‑90 (MQ=255) cATACTGTCCGTTTTTCTTCAGTTGTTCGAGAATGCGTTTTACACCCTGTTCAACAGAATAAACGGAAGCGTAGTAGTTATCTGCTGttt > 2:119816/1‑90 (MQ=255) gTCCGTTTTTCTTCAGTTGTTCGAGAATGCGTTTTACACCCTGTTCAACAGAATAAACGGAAGCgtagt < 1:160595/69‑1 (MQ=255) gTCCGTTTTTCTTCAGTTGTTCGAGAATGCGTTTTACACCCTGTTCAACAGAATAAACGGAAGCgtagt > 2:160595/1‑69 (MQ=255) gTCCGTTTTTCTTCAGTTGTTCGAGAATGCGTTTTACACCCTGTTCAACAGAATAAACGGAAGCGTAGTAGTTATCTGCTGTTTGACTAc > 1:195703/1‑90 (MQ=255) gTCCGTTTTTCTTCAGTTGTTCGAGAATGCGTTTTACACCCTGTTCAACAGAATAAACGGAAGCGTAGTAGTTATCTGCTGTTTGACTAc > 2:254389/1‑90 (MQ=255) tCCGTTTTTCTTCAGTTGTTCGAGAATGCGTTTTACACCCTGTTCAACAGAATAAACGGAAGCGTAGTAGTTATCTGCTGTTTGACTAcc < 2:259397/90‑1 (MQ=255) ccGTTTTTCTTCAGTTGTTCGAGAATGCGTTTTACACCCTGTTCAACAGAATAAACGGAAGCGTAGTAGTTATCTGCTGTTTGACTACCg > 2:271356/1‑90 (MQ=255) ccGTTTTTCTTCAGTTGTTCGAGAATGCGTTTTACACCCTGTTCAACAGAATAAACGGAAGCGTAGTAGTTATCTGCTGTTTGACTACCg > 2:331396/1‑90 (MQ=255) gttgttCGAGAATGCGTTTTACACCCTGTTCAACAGAATAAACGGAAGCGTAGTAGTTATCTGCTGTTTGACTACCGGTATTAAATTGCt > 1:139541/1‑90 (MQ=255) cccTGTTCAACAGAATAAACGGAAGCGTAGTAGTTATCTGCTGTTTGACTACCGGTATTAAATTGCTTCTGATATTGATCCGGTGCAGGa > 1:338506/1‑90 (MQ=255) cTGTTCAACAGAATAAACGGAAGCGTAGTAGTTATCTGCTGTTTGACTACCGGTATTAAATTGCTTCTGATATTGATCCGGTGCAGGAtt > 1:213624/1‑90 (MQ=255) | GCACCATTATCGGAGGTAAAGAGAATAATTGTATTGTCATACTGTCCGTTTTTCTTCAGTTGTTCGAGAATGCGTTTTACACCCTGATCAACAGAATAAACGGAAGCGTAGTAGTTATCTGCTGTTTGACTACCGGTATTAAATTGCTTCTGATATTGATCCGGTGCAGGATT > NZ_CP009273/1575739‑1575911 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |