Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | NZ_CP009273 | 2,038,183 | (T)5→4 | intergenic (+78/‑236) | BW25113_RS10330 → / → yeeJ | tRNA‑Asn/inverse autotransporter adhesin YeeJ |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NZ_CP009273 | 2,038,179 | 0 | T | . | 100.0% | 29.7 / NA | 8 | intergenic (+74/‑240) | BW25113_RS10330/yeeJ | tRNA‑Asn/inverse autotransporter adhesin YeeJ |
Reads supporting (aligned to +/- strand): ref base T (0/0); new base . (1/7); total (1/7) |
AAATTCTAAAAATTCGCTTTTTTAGCGCAATGTCACTGACCTTAGTTGAACATTGTTTTTTAACGGATAGCGGGTTTTTAACATCTTAAGCGCCCTCGACCTTTATGGTTGAGGGCGTTTTGCTATGAACGCCATCACCATTTTCCCCTC > NZ_CP009273/2038105‑2038254 | aaaTTCTAAAAATTCGCTTTTTTAGCGCAATGTCACTGACCTTAGTTGAACATTGTTTTTTAACGGATAGCGGG‑TTTTAACATCTTAAgc < 1:393961/90‑1 (MQ=255) aaaTTCTAAAAATTCGCTTTTTTAGCGCAATGTCACTGACCTTAGTTGAACATTGTTTTTTAACGGATAGCGGG‑TTTTAACATCTTAAgc < 2:34190/90‑1 (MQ=255) aaaaaTTCGCTTTTTTAGCGCAATGTCACTGACCTTAGTTGAACATTGTTTTTTAACGGATAGCGGG‑TTTTAACATCTTAAGCGCCCTCg < 2:58067/90‑1 (MQ=255) gcgcAATGTCACTGACCTTAGTTGAACATTGTTTTTTAACGGATAGCGGG‑TTTTAACATCTTAAGCGCCCTCGACCTTTATGGTTGAggg < 1:220939/90‑1 (MQ=255) aTGTCACTGACCTTAGTTGAACATTGTTTTTTAACGGATAGCGGG‑TTTTAACATCTTAAGCGCCCTCGACCTTTATGGTTGAGGGCGttt < 1:349601/90‑1 (MQ=255) ccTTAGTTGAACATTGTTTTTTAACGGATAGCGGG‑TTTTAACATCTTAAGCGCCCTCGACCTTTATGGTTGAGGGCGTTTTGCTATGAAc < 1:277948/90‑1 (MQ=255) aaCATTGTTTTTTAACGGATAGCGGG‑TTTTAACATCTTAAGCGCCCTCGACCTTTATGGTTGAGGGCGTTTTGCTATGAACGCCATCAcc > 1:114043/1‑90 (MQ=255) ttAACGGATAGCGGG‑TTTTAACATCTTAAGCGCCCTCGACCTTTATGGTTGAGGGCGTTTTGCTATGAACGCCATCACCATTTTCCCCTc < 2:331292/90‑1 (MQ=255) | AAATTCTAAAAATTCGCTTTTTTAGCGCAATGTCACTGACCTTAGTTGAACATTGTTTTTTAACGGATAGCGGGTTTTTAACATCTTAAGCGCCCTCGACCTTTATGGTTGAGGGCGTTTTGCTATGAACGCCATCACCATTTTCCCCTC > NZ_CP009273/2038105‑2038254 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |