Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | NZ_CP009273 | 2,759,232 | (G)6→7 | intergenic (‑97/‑45) | yfjM ← / → rnlA | DUF1524 domain‑containing protein/type II toxin‑antitoxin system toxin mRNA endoribonuclease RnlA |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NZ_CP009273 | 2,759,226 | 1 | . | G | 100.0% | 22.3 / NA | 8 | intergenic (‑91/‑51) | yfjM/rnlA | DUF1524 domain‑containing protein/type II toxin‑antitoxin system toxin mRNA endoribonuclease RnlA |
Reads supporting (aligned to +/- strand): ref base . (0/0); new base G (7/1); total (7/1) |
GACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCA‑GGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAA > NZ_CP009273/2759142‑2759297 | gACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCA‑ggggg < 2:386551/90‑1 (MQ=255) aCTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCA‑gggggg < 1:433904/90‑1 (MQ=255) cccccccGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCA‑gggggggtat < 1:217644/90‑5 (MQ=255) cccccccGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCA‑gggggggtat < 1:40382/90‑5 (MQ=255) tAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGGTATTATTGTaga > 2:470470/1‑90 (MQ=255) ataGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGGTATTATTGTAGAGTTTCCCCATATGttt > 2:217361/1‑90 (MQ=255) tGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATg > 2:281654/1‑90 (MQ=255) tGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATc > 2:48091/1‑90 (MQ=255) gCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATcc > 2:168179/1‑90 (MQ=255) gCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATcc > 2:53984/1‑90 (MQ=255) ggTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACaa > 1:294468/1‑90 (MQ=255) gCAAATCAATACACTTCAGGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACaaa < 1:470470/90‑1 (MQ=255) | GACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCA‑GGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAA > NZ_CP009273/2759142‑2759297 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |