Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | NZ_CP009273 | 915,296 | C→G | G202G (GGC→GGG) | macA → | macrolide transporter subunit MacA |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NZ_CP009273 | 915,296 | 0 | C | G | 100.0% | 29.4 / NA | 10 | G202G (GGC→GGG) | macA | macrolide transporter subunit MacA |
Reads supporting (aligned to +/- strand): ref base C (0/0); new base G (4/6); total (4/6) |
CGATACGGCTAAAACCAATCTCGATTACACTCGCATCGTTGCCCCGATGGCCGGGGAAGTCACGCAAATCACCACTCTGCAAGGCCAGACGGTGATTGCCGCACAACAAGCACCGAACATTCTGACGCTGGCAGATATGAGCGCCATGCTGGTAAAAGCGCAGGTTTC > NZ_CP009273/915212‑915379 | cGATACGGCTAAAACCAATCTCGATTACACTCGCATCGTTGCCCCGATGGCCGGGGAAGTCACGCAAATCACCACTCTGCAAGGGCAGAc < 1:374551/90‑1 (MQ=255) cGATACGGCTAAAACCAATCTCGATTACACTCGCATCGTTGCCCCGATGGCCGGGGAAGTCACGCAAATCACCACTCTGCAAGGGCAGAc < 2:176449/90‑1 (MQ=255) ggCTAAAACCAATCTCGATTACACTCGCATCGTTGCCCCGATGGCCGGGGAAGTCACGCAAATCACCACTCTGCAAGGGCAGACGGTGAt > 2:112855/1‑90 (MQ=255) aCCAATCTCGATTACACTCGCATCGTTGCCCCGATGGCCGGGGAAGTCACGCAAATCACCACTCTGCAAGGGCAGACGGTGATTGCCGca < 2:388642/90‑1 (MQ=255) aTCTCGATTACACTCGCATCGTTGCCCCGATGGCCGGGGAAGTCACGCAAATCACCACTCTGCAAGGGCAGACGGTGATTGCCGCacaac > 1:31344/1‑90 (MQ=255) tctcGATTACACTCGCATCGTTGCCCCGATGGCCGGGGAAGTCACGCAAATCACCACTCTGCAAGGGCAGACGGTGATTGCCGCacaaca < 1:403378/90‑1 (MQ=255) cccGATGGCCGGGGAAGTCACGCAAATCACCACTCTGCAAGGGCAGACGGTGATTGCCGCACAACAAGCACCGAACATTCTGACGCTGGc < 2:31344/90‑1 (MQ=255) acTCTGCAAGGGCAGACGGTGATTGCCGCACAACAAGCACCGAACATTCTGACGCTGGCAGATATGAGCGCCATGCTGGTAAAAGCGCAg < 1:300431/90‑1 (MQ=255) ctGCAAGGGCAGACGGTGATTGCCGCACAACAAGCACCGAACATTCTGACGCTGGCAGATATGAGCGCCATGCTGGTAAAAGCGCAGGtt > 2:131704/1‑90 (MQ=255) gCAAGGGCAGACGGTGATTGCCGCACAACAAGCACCGAACATTCTGACGCTGGCAGATATGAGCGCCATGCTGGTAAAAGCGCAGGTTTc > 2:151208/1‑90 (MQ=255) | CGATACGGCTAAAACCAATCTCGATTACACTCGCATCGTTGCCCCGATGGCCGGGGAAGTCACGCAAATCACCACTCTGCAAGGCCAGACGGTGATTGCCGCACAACAAGCACCGAACATTCTGACGCTGGCAGATATGAGCGCCATGCTGGTAAAAGCGCAGGTTTC > NZ_CP009273/915212‑915379 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |