Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | NZ_CP009273 | 1,575,825 | A→T | D319E (GAT→GAA) | ydeN ← | sulfatase |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NZ_CP009273 | 1,575,825 | 0 | A | T | 100.0% | 58.1 / NA | 16 | D319E (GAT→GAA) | ydeN | sulfatase |
Reads supporting (aligned to +/- strand): ref base A (0/0); new base T (11/5); total (11/5) |
GCACCATTATCGGAGGTAAAGAGAATAATTGTATTGTCATACTGTCCGTTTTTCTTCAGTTGTTCGAGAATGCGTTTTACACCCTGATCAACAGAATAAACGGAAGCGTAGTAGTTATCTGCTGTTTGACTACCGGTATTAAATTGCTTCTGATATTGATCCGGTGCAGGA > NZ_CP009273/1575739‑1575909 | gCACCATTATCGGAGGTAAAGAGAATAATTGTATTGTCATACTGTCCGTTTTTCTTCAGTTGTTCGAGAATGCGTTTTACACCCTGTTCa > 2:46506/1‑90 (MQ=255) ccATTATCGGAGGTAAAGAGAATAATTGTATTGTCATACTGTCCGTTTTTCTTCAGTTGTTCGAGAATGCGTTTTACACCCTGTTCAACa > 2:52020/1‑90 (MQ=255) aGGTAAAGAGAATAATTGTATTGTCATACTGTCCGTTTTTCTTCAGTTGTTCGAGAATGCGTTTTACACCCTGTTCAACAGAATAAACgg > 2:341475/1‑90 (MQ=255) ggTAAAGAGAATAATTGTATTGTCATACTGTCCGTTTTTCTTCAGTTGTTCGAGAATGCGTTTTACACCCTGTTCAACAGAATAAACGGa < 2:236322/90‑1 (MQ=255) ataatTGTATTGTCATACTGTCCGTTTTTCTTCAGTTGTTCGAGAATGCGTTTTACACCCTGTTCAACAGAATAAACGGAAGCGtagtag > 2:179203/1‑90 (MQ=255) ataatTGTATTGTCATACTGTCCGTTTTTCTTCAGTTGTTCGAGAATGCGTTTTACACCCTGTTCAACAGAATAAACGGAAGCGtagtag > 2:245162/1‑90 (MQ=255) tCATACTGTCCGTTTTTCTTCAGTTGTTCGAGAATGCGTTTTACACCCTGTTCAACAGAATAAACGGAAGCGTAGTAGTTATCTGCTGtt < 2:372649/90‑1 (MQ=255) cATACTGTCCGTTTTTCTTCAGTTGTTCGAGAATGCGTTTTACACCCTGTTCAACAGAATAAACGGAAGCGTAGTAGTTATCTGCTGttt > 1:457885/1‑90 (MQ=255) tGTCCGTTTTTCTTCAGTTGTTCGAGAATGCGTTTTACACCCTGTTCAACAGAATAAACGGAAGCGTAGTAGTTATCTGCTGTTTGACTa > 2:158422/1‑90 (MQ=255) gTCCGTTTTTCTTCAGTTGTTCGAGAATGCGTTTTACACCCTGTTCAACAGAATAAACGGAAGCGTAGTAGTTATCTGCTGTTTGACTAc > 1:10079/1‑90 (MQ=255) gTCCGTTTTTCTTCAGTTGTTCGAGAATGCGTTTTACACCCTGTTCAACAGAATAAACGGAAGCGTAGTAGTTATCTGCTGTTTGACTAc < 1:260987/90‑1 (MQ=255) gTCCGTTTTTCTTCAGTTGTTCGAGAATGCGTTTTACACCCTGTTCAACAGAATAAACGGAAGCGTAGTAGTTATCTGCTGTTTGACTAc > 2:416263/1‑90 (MQ=255) tCCGTTTTTCTTCAGTTGTTCGAGAATGCGTTTTACACCCTGTTCAACAGAATAAACGGAAGCGTAGTAGTTATCTGCTGTTTGACTAcc < 1:416263/90‑1 (MQ=255) tCCGTTTTTCTTCAGTTGTTCGAGAATGCGTTTTACACCCTGTTCAACAGAATAAACGGAAGCGTAGTAGTTATCTGCTGTTTGACTAcc < 1:52020/90‑1 (MQ=255) aaTGCGTTTTACACCCTGTTCAACAGAATAAACGGAAGCGTAGTAGTTATCTGCTGTTTGACTACCGGTATTAAATTGCTTCTGATATTg > 1:84203/1‑90 (MQ=255) cccTGTTCAACAGAATAAACGGAAGCGTAGTAGTTATCTGCTGTTTGACTACCGGTATTAAATTGCTTCTGATATTGATCCGGTGCAGGa > 2:79367/1‑90 (MQ=255) | GCACCATTATCGGAGGTAAAGAGAATAATTGTATTGTCATACTGTCCGTTTTTCTTCAGTTGTTCGAGAATGCGTTTTACACCCTGATCAACAGAATAAACGGAAGCGTAGTAGTTATCTGCTGTTTGACTACCGGTATTAAATTGCTTCTGATATTGATCCGGTGCAGGA > NZ_CP009273/1575739‑1575909 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |