| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 1,313,652 | C→G | A132P (GCC→CCC) | trpCF ← | bifunctional indole‑3‑glycerol‑phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 1,313,652 | 0 | C | G | 100.0% | 44.6 / NA | 15 | A132P (GCC→CCC) | trpCF | bifunctional indole‑3‑glycerol‑phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base G (9/6); total (9/6) | |||||||||||
CCCATCTCCAGACTGTGAGCGACGGCGGCAAGCTGGCGATATTGGTCGTCATCCAGTACTGAAAGCATTAATAAGCAGGCATCGGCCTGGTAATAGCGCGCCAGATAGATCTGGTAAGGGTCGATAATGAAGTCTTTACATAAAATCGGCTGCGGGGC > NZ_CP009273/1313567‑1313724 | cccATCTCCAGACTGTGAGCGACGGCGGCAAGCTGGCGATATTGGTCGTCATCCAGTACTGAAAGCATTAATAAGCAGGCATCGGGCTgg > 2:613416/1‑90 (MQ=255) gtgAGCGACGGCGGCAAGCTGGCGATATTGGTCGTCATCCAGTACTGAAAGCATTAATAAGCAGGCATCGGGCTGGTAATAGCGCGCCag > 1:420754/1‑90 (MQ=255) gtgAGCGACGGCGGCAAGCTGGCGATATTGGTCGTCATCCAGTACTGAAAGCATTAATAAGCAGGCATCGGGCTGGTAATAGCGCGCCag > 1:48326/1‑90 (MQ=255) gtgAGCGACGGCGGCAAGCTGGCGATATTGGTCGTCATCCAGTACTGAAAGCATTAATAAGCAGGCATCGGGCTGGTAATAGCGCGCCag > 2:569557/1‑90 (MQ=255) gAGCGACGGCGGCAAGCTGGCGATATTGGTCGTCATCCAGTACTGAAAGCATTAATAAGCAGGCATCGGGCTGGTAATAGCGCGCCagat < 1:543804/90‑1 (MQ=255) gAGCGACGGCGGCAAGCTGGCGATATTGGTCGTCATCCAGTACTGAAAGCATTAATAAGCAGGCATCGGGCTGGTAATAGCGCGCCagat < 2:432961/90‑1 (MQ=255) gAGCGACGGCGGCAAGCTGGCGATATTGGTCGTCATCCAGTACTGAAAGCATTAATAAGCAGGCATCGGGCTGGTAATAGCGCGCCagat < 2:521023/90‑1 (MQ=255) gAGCGACGGCGGCAAGCTGGCGATATTGGTCGTCATCCAGTACTGAAAGCATTAATAAGCAGGCATCGGGCTGGTAATAGCGCGCCagat > 2:543804/1‑90 (MQ=255) gAGCGACGGCGGCAAGCTGGCGATATTGGTCGTCATCCAGTACTGAAAGCATTAATAAGCAGGCATCGGGCTGGTAATAGCGCGCCagat < 2:70501/90‑1 (MQ=255) cTGGCGATATTGGTCGTCATCCAGTACTGAAAGCATTAATAAGCAGGCATCGGGCTGGTAATAGCGCGCCAGATAGATCTGGTAAGGGTc < 1:112434/90‑1 (MQ=255) ttGGTCGTCATCCAGTACTGAAAGCATTAATAAGCAGGCATCGGGCTGGTAATAGCGCGCCAGATAGATCTGGTAAGGGTCGATAATGaa < 2:577452/90‑1 (MQ=255) tcATCCAGTACTGAAAGCATTAATAAGCAGGCATCGGGCTGGTAATAGCGCGCCAGATAGATCTGGTAAGGGTCGATAATGAAGTCTTTa > 1:264643/1‑90 (MQ=255) gAAAGCATTAATAAGCAGGCATCGGGCTGGTAATAGCGCGCCAGATAGATCTGGTAAGGGTCGATAATGAAGTCTTTACATAAAATCGGc > 1:326581/1‑90 (MQ=255) cATTAATAAGCAGGCATCGGGCTGGTAATAGCGCGCCAGATAGATCTGGTAAGGGTCGATAATGAAGTCTTTACATAAAATCGGCTGCgg > 1:646312/1‑90 (MQ=255) taataaGCAGGCATCGGGCTGGTAATAGCGCGCCAGATAGATCTGGTAAGGGTCGATAATGAAGTCTTTACATAAAATCGGCTGCGGGGc > 1:577475/1‑90 (MQ=255) | CCCATCTCCAGACTGTGAGCGACGGCGGCAAGCTGGCGATATTGGTCGTCATCCAGTACTGAAAGCATTAATAAGCAGGCATCGGCCTGGTAATAGCGCGCCAGATAGATCTGGTAAGGGTCGATAATGAAGTCTTTACATAAAATCGGCTGCGGGGC > NZ_CP009273/1313567‑1313724 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |