| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 1,717,498 | G→C | G374A (GGC→GCC) | ydhK → | FUSC family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 1,717,498 | 0 | G | C | 100.0% | 68.9 / NA | 22 | G374A (GGC→GCC) | ydhK | FUSC family protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base C (10/12); total (10/12) | |||||||||||
GGACATCCGGCCTGGCTCGTCATACCGATAACGCCGAAGCTATGTGGAGCGGGCTGCGTACATTTTGTACGTTGATGATGATTGGCGCATGGAGTATTGCTTCGCAATGGGATGCCGGTGCCAATGCATTAACGCTGGCAGCAATTAGCTGCGTACTCTACTCCGCC > NZ_CP009273/1717414‑1717580 | ggACATCCGGCCTGGCTCGTCATACCGATAACGCCGAAGCTATGTGGAGCGGGCTGCGTACATTTTGTACGTTGATGATGATTGCCGCAt < 2:85839/90‑1 (MQ=255)ggACATCCGGCCTGGCTCGTCATACCGATAACGCCGAAGCTATGTGGAGCGGGCTGCGTACATTTTGTACGTTGATGATGATTGCCGCAt < 1:537665/90‑1 (MQ=255)ggACATCCGGCCTGGCTCGTCATACCGATAACGCCGAAGCTATGGGGAGCGGGCTGCGTACATTTTGTACGTTGATGATGATTGCCGCAt > 2:508809/1‑90 (MQ=255) tCCGGCCTGGCTCGTCACACCGATAACGCCGGAGCTATGAGGAGCGGGCTGCGCACATTTTGTACGTTGATGATGATTGCCGCATGGAGt > 2:415245/1‑90 (MQ=255) cGTCATACCGATAACGCCGAAGCTATGTGGAGCGGGCTGCGTACATTTTGTACGTTGATGATGATTGCCGCATGGAGTATTGCTTCGCaa < 2:318334/90‑1 (MQ=255) tACCGATAACGCCGAAGCTATGTGGAGCGGGCTGCGTACATTTTGTACGTTGATGATGATTGCCGCATGGAGTATTGCTTCGCAATGGGa < 1:499573/90‑1 (MQ=255) tACCGATAACGCCGAAGCTATGTGGAGCGGGCTGCGTACATTTTGTACGTTGATGATGATTGCCGCATGGAGTATTGCTTCGCAATGGGa < 1:521936/90‑1 (MQ=255) tAACGCCGAAGCTATGTGGAGCGGGCTGCGTACATTTTGTACGTTGATGATGATTGCCGCATGGAGTATTGCTTCGCAATGGGATGCCgg < 1:246787/90‑1 (MQ=255) cGCCGAAGCTATGTGGAGCGGGCTGCGTACATTTTGTACGTTGATGATGATTGCCGCATGGAGTATTGCTTCGCAATGGGATGCCGGTGc > 1:54824/1‑90 (MQ=255) ccGAAGCTATGTGGAGCGGGCTGCGTACATTTTGTACGTTGATGATGATTGCCGCATGGAGTATTGCTTCGCAATGGGATGCCGGTGCCa < 1:483223/90‑1 (MQ=255) ccGAAGCTATGTGGAGCGGGCTGCGTACATTTTGTACGTTGATGATGATTGCCGCATGGAGTATTGCTTCGCAATGGGATGCCGGTGCCa > 2:5533/1‑90 (MQ=255) gAAGCTATGTGGAGCGGGCTGCGTACATTTTGTACGTTGATGATGATTGCCGCATGGAGTATTGCTTCGCAATGGGATGCCGGTGCCAAt > 2:526664/1‑90 (MQ=255) aTGTGGAGCGGGCTGCGTACATTTTGTACGTTGATGATGATTGccg > 2:315505/1‑46 (MQ=255) aTGTGGAGCGGGCTGCGTACATTTTGTACGTTGATGATGATTGccg < 1:315505/46‑1 (MQ=255) aTGTGGAGCGGGCTGCGTACATTTTGTACGTTGATGATGATTGCCGCATGGAGTATTGCTTCGCAATGGGATGCCGGTGCCAATGCATTa > 2:194179/1‑90 (MQ=255) gCGGGCTGCGTACATTTTGTACGTTGATGATGATTGCCGCATGGAGTATTGCTTCGCAATGGGATGCCGGGGCCAATGCATTAACGCTgg > 1:356501/1‑90 (MQ=255) cGGGCTGCGTACATTTTGTACGTTGATGATGATTGCCGCATGGAGTATTGCTTCGCAATGGGATGCCGGTGCCAATGCATTAACGCTGgc < 2:171243/90‑1 (MQ=255) ggCTGCGTACATTTTGTACGTTGATGATGATTGCCGCATGGAGTATTGCTTCGCAATGGGATGCCGGTGCCAATGCATTAACGCTGgcag > 2:243000/1‑90 (MQ=255) ggCTGCGTACATTTTGTACGTTGATGATGATTGCCGCATGGAGTATTGCTTCGCAATGGGATGCCGGTGCCAATGCATTAACGCTGgcag < 1:30026/90‑1 (MQ=255) tttGTACGTTGATGATGATTGCCGCATGGAGTATTGCTTCGCAATGGGATGCCGGTGCCAATGCATTAACGCTGGCAGCAATTAGCTGCg < 2:603582/90‑1 (MQ=255) tGTACGTTGATGATGATTGCCGCATGGAGTATTGCTTCGCAATGGGATGCCGGTg < 2:139707/55‑1 (MQ=255) tGTACGTTGATGATGATTGCCGCATGGAGTATTGCTTCGCAATGGGATGCCGGTg > 1:139707/1‑55 (MQ=255) gTTGATGATGATTGCCGCATGGAGTATTGCTTCGCAATGGGATGCCGGTGCCAATGCATTAACGCTGGCAGCAATTAGCTGCGtactcta > 2:392744/1‑90 (MQ=255) atgatTGCCGCATGGAGTATTGCTTCGCAATGGGATGCCGGTGCCAATGCATTAACGCTGGCAGCAATTAGCTGCGTACTCTACTccgcc < 1:5533/90‑1 (MQ=255) | GGACATCCGGCCTGGCTCGTCATACCGATAACGCCGAAGCTATGTGGAGCGGGCTGCGTACATTTTGTACGTTGATGATGATTGGCGCATGGAGTATTGCTTCGCAATGGGATGCCGGTGCCAATGCATTAACGCTGGCAGCAATTAGCTGCGTACTCTACTCCGCC > NZ_CP009273/1717414‑1717580 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |