Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1139321	1139360	40	3 [0]	[1] 2	rne	ribonuclease E

GCGGCTTTTTTGATGGCTTCCCAGTGTTTCAGACGGAAGCTTAAATCCCATTGCAGCGCCTCAGCAGATTTGCCGACGCCAGCGGTGCGC  >  NZ_CP009273/1139231‑1139320                                                                                          | gCGGCTTTTTTGATGGCTTCCCAGTGTTTCAGACGGAAGCTTAAATCCCATTGCAGCGCCTCAGCAGATTTGCCGACGCCAGCGGTgcgc  <  1:334534/90‑1 (MQ=255)                                                ccATTGCAGCGCCTCAGCAGATTTGCCGACGCCAGCGGTgcgc  >  1:70942/1‑43 (MQ=255)                                                ccATTGCAGCGCCTCAGCAGATTTGCCGACGCCAGCGGTgcgc  <  2:70942/43‑1 (MQ=255)                                                                                          | GCGGCTTTTTTGATGGCTTCCCAGTGTTTCAGACGGAAGCTTAAATCCCATTGCAGCGCCTCAGCAGATTTGCCGACGCCAGCGGTGCGC  >  NZ_CP009273/1139231‑1139320

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑