Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2099582	2099619	38	2 [0]	[1] 2	wzy	O16 family O‑antigen polymerase

ACTTTATTTTCTGGGCCTTAAGAAATTGAGAGAATACTA  >  NZ_CP009273/2099543‑2099581                                       | aCTTTATTTTCTGGGCCTTAAGAAATTGAGAGAATACTa  >  1:289526/1‑39 (MQ=255) aCTTTATTTTCTGGGCCTTAAGAAATTGAGAGAATACTa  <  2:289526/39‑1 (MQ=255)                                       | ACTTTATTTTCTGGGCCTTAAGAAATTGAGAGAATACTA  >  NZ_CP009273/2099543‑2099581

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑