Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1313869	1313869	1	2 [0]	[0] 2	trpCF	bifunctional indole‑3‑glycerol‑phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF

GACGCTTTCTTGCACTCCAGAATAAACGCCGTGCGCGCAC  >  NZ_CP009273/1313870‑1313909 |                                        gACGCTTTCTTGCACTCCAGAATAAACGCCGTGCGCGCAc  <  1:113488/40‑1 (MQ=255) gACGCTTTCTTGCACTCCAGAATAAACGCCGTGCGCGCAc  >  2:113488/1‑40 (MQ=255) |                                        GACGCTTTCTTGCACTCCAGAATAAACGCCGTGCGCGCAC  >  NZ_CP009273/1313870‑1313909

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑