| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 181,707 | C→G | G243A (GGC→GCC) | dapD ← | 2,3,4,5‑tetrahydropyridine‑2,6‑dicarboxylate N‑succinyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 181,707 | 0 | C | G | 100.0% | 72.7 / NA | 23 | G243A (GGC→GCC) | dapD | 2,3,4,5‑tetrahydropyridine‑2,6‑dicarboxylate N‑succinyltransferase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base G (12/11); total (12/11) | |||||||||||
ACGCAGCAGTTCGTTAATGCCGACTTTGCCGCGAGTTTTCGCGTCAACTTTCTTAACGATAACCGCACAGTAGAGGCTGTATTTGCCATCTTTTGACGGCAGATTACCTGAAACAACCACAGACCCCGCCGGAACGCGACCGTAGTGGATTTCGCCGGTTTCACGGTCG > NZ_CP009273/181622‑181790 | aCGCAGCAGTTCGTTAATGCCGACTTTGCCGCGAGTTTTCGCGTCAACTTTCTTAACGATAACCGCACAGTAGAGGCTGTATTTGGCATc < 2:184333/90‑1 (MQ=255)aCGCAGCAGTTCGTTAATGCCGACTTTGCCGCGAGTTTTCGCGTCAACTTTCTTAACGATAACCGCACAGTAGAGGCTGTATTTGGCATc < 2:440586/90‑1 (MQ=255) gTTCGTTAATGCCGACTTTGCCGCGAGTTTTCGCGTCAACTTTCTTAACGATAACCGCACAGTAGAGGCTGTATTTGGCATCTTTTGACg > 2:317589/1‑90 (MQ=255) gTTCGTTAATGCCGACTTTGCCGCGAGTTTTCGCGTCAACTTTCTTAACGATAACCGCACAGTAGAGGCTGTACTTGGCATCTTTTGACg > 2:417970/1‑90 (MQ=255) tAATGCCGACTTTGCCGCGAGTTTTCGCGTCAACTTTCTTAACGATAACCGCACAGTAGAGGCTGTATTTGGCATCTTTTGACGGCAGAt < 2:255185/90‑1 (MQ=255) gACTTTGCCGCGAGTTTTCGCGTCAACTTTCTTAACGATAACCGCACAGTAGAGGCTGTATTTGGCATCTTTTGACGGCAGATTACCTGa > 2:414237/1‑90 (MQ=255) cTTTGCCGCGAGTTTTCGCGTCAACTTTCTTAACGATAACCGCACAGTAGAGGCTGTATTTGGCATCTTTTGACGGCAGATTACCTGaaa > 2:136494/1‑90 (MQ=255) tttGCCGCGAGTTTTCGCGTCAACTTTCTTAACGATAACCGCACAGTAGAGGCTGTATTTGGCATCTTTTGACGGCAGATTACCTGAaac < 1:130545/90‑1 (MQ=255) tGCCGCGAGTTTTCGCGTCAACTTTCTTAACGATAACCGCACAGTAGAGGCTGTATTTGGCATCTTTTGACGGCAGATTACCTGAaacaa > 1:213793/1‑90 (MQ=255) tGCCGCGAGTTTTCGCGTCAACTTTCTTAACGATAACCGCACAGTAGAGGCTGTATTTGGCATCTTTTGACGGCAGATTACCTGAaac > 2:484804/1‑88 (MQ=255) tGCCGCGAGTTTTCGCGTCAACTTTCTTAACGATAACCGCACAGTAGAGGCTGTATTTGGCATCTTTTGACGGCAGATTACCTGAaac < 1:484804/88‑1 (MQ=255) cTTTCTTAACGATAACCGCACAGTAGAGGCTGTATTTGGCATCTTTTGACGGCAGATTACCTGAAACAACCACAGACCCCGCCGGAAcgc < 1:556255/90‑1 (MQ=255) tCTTAACGATAACCGCACAGTAGAGGCTGTATTTGGCATCTTTTGACGGCAGATTCCCTGAAACAACCACAGACCCCGCCGGAACGCGAc < 1:361647/90‑1 (MQ=255) aaCCGCACAGTAGAGGCTGTATTTGGCATCTTTTGACGGCAGATTACCTGAAACAACCACAGACCCCGCCGGAACGCGACCGTAGTGGAt > 2:415552/1‑90 (MQ=255) acaGTAGAGGCTGTATTTGGCATCTTTTGACGGCAGATTACCTGAAACAACCACAGACCCCGCCGGAACGCGACCGTAGTGGATTTCGcc > 2:38031/1‑90 (MQ=255) gTAGAGGCTGTATTTGGCATCTTTTGACGGCAGATTACCTGAAACAACCACAAACCCCGCCGGAACGCGACCGTAGTGGATTTCGCCGGt > 2:321609/1‑90 (MQ=255) ggCTGTATTTGGCATCTTTTGACGGCAGATTACCTGAaaca > 1:16112/1‑41 (MQ=255) ggCTGTATTTGGCATCTTTTGACGGCAGATTACCTGAaaca < 2:16112/41‑1 (MQ=255) ggCTGTATTTGGCATCTTTTGACGGCAGATTACCTGAAACAACCACAGACCCCGCCGGAACGCGACCGTAGTGGATTTCGCCGGTTTCAc < 2:401451/90‑1 (MQ=255) cTGTATTTGGCATCTTTTGACGGCAGATTACCTGAAACAACCACAGACCCCGCCGGAACGCGACCGTAGTGGATTTCGCCGGTTTCACgg < 2:161576/90‑1 (MQ=255) cTGTATTTGGCATCTTTTGACGGCAGATTACCTGAAACAACCACAGACCCCGCCGGAACGCGACCGTAGTGGATTTCGCCGGTTTCACgg < 2:146151/90‑1 (MQ=255) tGTATTTGGCATCTTTTGACGGCAGATTACCTGAAACAACCACAGACCCCGCCGGAACGCGACCGTAGTGGATTTCGCCGGTTTCACGGt > 2:379736/1‑90 (MQ=255) tATTTGGCATCTTTTGACGGCAGATTACCTGAAACAACCACAGACCCCGCCGGAACGCGACCGTAGTGGATTTCGCCGGTTTCACGGTCg > 2:234118/1‑90 (MQ=255) | ACGCAGCAGTTCGTTAATGCCGACTTTGCCGCGAGTTTTCGCGTCAACTTTCTTAACGATAACCGCACAGTAGAGGCTGTATTTGCCATCTTTTGACGGCAGATTACCTGAAACAACCACAGACCCCGCCGGAACGCGACCGTAGTGGATTTCGCCGGTTTCACGGTCG > NZ_CP009273/181622‑181790 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |