| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 3,739,446 | A→G | intergenic (+5/‑8) | yiaN → / → yiaO | 2,3‑diketo‑L‑gulonate transporter large permease YiaN/2,3‑diketo‑L‑gulonate transporter substrate‑binding protein YiaO |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 3,739,446 | 0 | A | G | 100.0% | 63.6 / NA | 20 | intergenic (+5/‑8) | yiaN/yiaO | 2,3‑diketo‑L‑gulonate transporter large permease YiaN/2,3‑diketo‑L‑gulonate transporter substrate‑binding protein YiaO |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (6/14); total (6/14) | |||||||||||
GGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCTCCCTTTGAAATGGATTAATTAAAAGGAAAATATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTGGCGGCAC > NZ_CP009273/3739366‑3739529 | ggTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCTCCCTTTGAAATGGATTAATTAAAAGGGAAAtattat < 2:414471/90‑1 (MQ=255) atTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCTCCCTTTGAAATGGATTAATTAAAAGGGAAATATTATGAAATTAc < 2:5908/90‑1 (MQ=255) atTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCTCCCTTTGAAATGGATTAATTAAAAGGGAAATATTATGAAATTAc < 2:15150/90‑1 (MQ=255) atTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCTCCCTTTGAAATGGATTAATTAAAAGGGAAATATTATGAAATTAc < 2:4179/90‑1 (MQ=255) tCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCTCCCTTTGAAATGGATTAATTAAAAGGGAAATATTATGAAATTACGc < 1:322761/90‑1 (MQ=255) attaGTCGTATTTGTTTTTATTCCCGATCTCATCATCCTCCCTTTGAAATGGATTAATTAAAAGGGAAATATTATGAAATTACGCTCTGt < 1:510440/90‑1 (MQ=255) tCGTATTTGTTTTTATTCCCGATCTCATCATCCTCCCTTTGAAATGGATTAATTAAAAGGGAAATATTATGAAATTACGCTCTGTAACCt > 2:182646/1‑90 (MQ=255) tATTTGTTTTTATTCCCGATCTCATCATCCTCCCTTTGAAATGGATTAATTAAAAGGGAAATATTATGAAATTACGCTCTGTAACCTACg > 1:486599/1‑90 (MQ=255) tATTTGTTTTTATTCCCGATCTCATCATCCTCCCTTTGAAATGGATTAATTAAAAGGGAAATATTATGAAATTACGCTCTGTAACCTACg > 2:442715/1‑90 (MQ=255) tttATTCCCGATCTCATCATCCTCCCTTTGAAATGGATTAATTAAAAGGGAAATATTATGAAATTACGCTCTGTAACCTACGCATTATTc < 2:513959/90‑1 (MQ=255) tcctccCTTTGAAATGGATTAATTAAAAGGGAAATATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCAt < 2:351099/90‑1 (MQ=255) tcctccCTTTGAAATGGATTAATTAAAAGGGAAATATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCAt < 1:272711/90‑1 (MQ=255) tccCTTTGAAATGGATTAATTAAAAGGGAAATATTATGAAATTACGCTCTGTAACCTa > 2:491216/1‑58 (MQ=255) tccCTTTGAAATGGATTAATTAAAAGGGAAATATTATGAAATTACGCTCTGTAACCTa < 1:491216/58‑1 (MQ=255) ccTTTGAAATGGATTAATTAAAAGGGAAATATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGc < 2:483553/90‑1 (MQ=255) ttGAAATGGATTAATTAAAAGGGAAATATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGcaca > 1:7756/1‑90 (MQ=255) taattaaAAGGGAAATATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTggc < 2:96324/90‑1 (MQ=255) aattaaAAGGGAAATATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTggcg > 2:483518/1‑90 (MQ=255) aaaaGGGAAATATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTGGCGGcac < 2:278717/90‑1 (MQ=255) aaaaGGGAAATATTATGAAATTACGCTCTGTAACCTACACATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTGGCGGcac < 2:111402/90‑1 (MQ=255) | GGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCTCCCTTTGAAATGGATTAATTAAAAGGAAAATATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTGGCGGCAC > NZ_CP009273/3739366‑3739529 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |