| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 108,362 | A→G | F242S (TTC→TCC) | zapD ← | cell division protein ZapD |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 108,362 | 0 | A | G | 100.0% | 85.1 / NA | 27 | F242S (TTC→TCC) | zapD | cell division protein ZapD |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (18/9); total (18/9) | |||||||||||
ACCCCACACCACCGTTTTCCCGCAGGTTGGGCAATTCACCGTAATAGTTTCTGACATTTTTACTCCTTAGCAACAGGCCAGTTCGAAATCCAGACGTTCCGGTACCT‑GTCCGTTTTCAGTGTCCAGCGGCATAAAACGAATGGCAAAACGGCTCTTATGTCCGGAAATTTG > NZ_CP009273/108277‑108447 | aCCCCACACCACCGTTTTCCCGCAGGTTGGGCAATTCACCGTAATAGTTTCTGACATTTTTACTCCTTAGCAACAGGCCAGTTCGGAATc > 2:293437/1‑90 (MQ=255)aCCCCACACCACCGTTTTCCCGCAGGTTGGGCAATTCACCGTAATAGTTTCTGACATTTTTACTCCTTAGCAACAGGCCAGTTCGGAATc > 1:502027/1‑90 (MQ=255) caccacCGTTTTCCCGCAGGTTGGGCAATTCACCGTAATAGTTTCTGACATTTTTACTCCTTAGCAACAGGCCAGTTCGGAATCCAGACg > 1:303584/1‑90 (MQ=255) accGTTTTCCCGCAGGTTGGGCAATTCACCGTAATAGTTTCTGACATTTTTACTCCTTAGCAACAGGCCAGTTCGGAATCCAGACGTTcc > 2:489307/1‑90 (MQ=255) accGTTTTCCCGCAGGTTGGGCAATTCACCGTAATAGTTTCTGACATTTTTACTCCTTAGCAACAGGCCAGTTCGGAATCCAGACGTTcc < 2:409767/90‑1 (MQ=255) gTTTTCCCGCAGGTTGGGCAATTCACCGTAATAGTTTCTGACATTTTTACTCCTTAGCAACAGGCCAGTTCGGAATCCAGACGTTCCGGt > 1:494292/1‑90 (MQ=255) cGCAGGTTGGGCAATTCACCGTAATAGTTTCTGACATTTTTACTCCTTAGCAACAGGCCAGTTCGGAATCCAGACGTTCCGGTACCT‑GTc < 2:499515/90‑1 (MQ=255) ggTTGGGCAATTCACCGTAATAGTTTCTGACATTTTTACTCCTTAGCAACAGGCCAGTTCGGAATCCAGACGTTCCGGTACCT‑GTCCGtt < 2:291882/90‑1 (MQ=255) gggCAATTCACCGTAATAGTTTCTGACATTTTTACTCCTTAGCAACAGGCCAGTTCGGAATCCAGACGTTCCGG‑ACCTGGTCGGttttag > 2:319416/1‑88 (MQ=255) ggCAATTCACCGTAATAGTTTCTGACATTTTTACTCCTTAGCAACAGGCCAGTTCGGAATCCAGACGTTCCGGTACCT‑GTCCGTTTTCAg < 2:303584/90‑1 (MQ=255) tCACCGTAATAGTTTCTGACATTTTTACTCCTTAGCAACAGGCCAGTTCGGAATCCAGACGTTCCGGTACCT‑GTCCGTTTTCAGTGTCCa > 2:59671/1‑90 (MQ=255) ccGTAATAGTTTCTGACATTTTTACTCCTTAGCAACAGGCCAGTTCGGAATCCAGACGTTCCGGTACCT‑Gt > 1:394515/1‑71 (MQ=255) ccGTAATAGTTTCTGACATTTTTACTCCTTAGCAACAGGCCAGTTCGGAATCCAGACGTTCCGGTACCT‑Gt < 2:394515/71‑1 (MQ=255) aTAGTTTCTGACATTTTTACTCCTTAGCAACAGGCCAGTTCGGAATCCAGACGTTCCGGTACCT‑GTCCGTTTTCAGTGTCCAGCGGCATa > 2:531789/1‑90 (MQ=255) ttCTGACATTTTTACTCCTTAGCAACAGGCCAGTTCGGAATCCAGACGTTCCGGTACCT‑GTCCGTTTTCAGTGTCCAGCGGCATAAAACg > 1:561638/1‑90 (MQ=255) ttCTGACATTTTTACTCCTTAGCAACAGGCCAGTTCGGAATCCAGACGTTCCGGTACCT‑GTCCGTTTTCAGTGTCCAGCGGCATAAAACg > 1:92174/1‑90 (MQ=255) ttCTGACATTTTTACTCCTTAGCAACAGGCCAGTTCGGAATCCAGACGTTCCGGTACCT‑GTCCGTTTTCAGTGTCCAGCGGCATAAAACg > 1:564402/1‑90 (MQ=255) ttACTCCTTAGCAACAGGCCAGTTCGGAATCCAGACGTTCCGGTACCT‑GTCCGTTTTCAGTGTCCAGCGGCATAAAACGAATGGCAAAAc < 2:494292/90‑1 (MQ=255) ttACTCCTTAGCAACAGGCCAGTTCGGAATCCAGACGTTCCGGTACCT‑GTCCGTTTTCAGTGTCCAGCGGCATAAAACGAATGGCAAAAc < 2:564402/90‑1 (MQ=255) ttAGCAACAGGCCAGTTCGGAATCCAGACGTTCCGGTACCT‑GTCCGTTTTCAGTGTCCAGCGGCATAAAACGAATGGCAAAACGGCTCtt > 2:361845/1‑90 (MQ=255) tAGCAACAGGCCAGTTCGGAATCCAGACGTTCCGGTACCT‑GTCCGTTTTCAGTGTCCAGCGGCATAAAACGAATGGCAAAACGGctctca > 1:322172/1‑88 (MQ=255) aCAGGCCAGTTCGGAATCCAGACGTTCCGGTACCT‑GTCCGTTTTCAGTGTCCAGCGGCATAAAACGAATGGCAAAACGGCTCTTATGTcc > 1:205641/1‑90 (MQ=255) aGGCCAGTTCGGAATCCAGACGTTCCGGTACCT‑GTCCGTTTTCAGTGTCCAGCGGCATAAAACGAATGGCAAAACGGCTCTTATGTCCgg > 1:497184/1‑90 (MQ=255) aGTTCGGAATCCAGACGTTCCGGTACCT‑GTCCGTTTTCAGTGTCCAGCGGCATAAAACGAATGGCAAAACGGCTCTTATGTCCGGAAAtt > 2:204602/1‑90 (MQ=255) gTTCGGAATCCAGACGTTCCGGTACCT‑GTCCGTTTTCAg < 1:413048/39‑1 (MQ=255) gTTCGGAATCCAGACGTTCCGGTACCT‑GTCCGTTTTCAg > 2:413048/1‑39 (MQ=255) ttCGGAATCCAGACGTTCCGGTACCT‑GTCCGTTTTCAGTGTCCAGCGGCATAAAACGAATGGCAAAACGGCTCTTATGTCCGGAAATTTg < 1:544577/90‑1 (MQ=255) | ACCCCACACCACCGTTTTCCCGCAGGTTGGGCAATTCACCGTAATAGTTTCTGACATTTTTACTCCTTAGCAACAGGCCAGTTCGAAATCCAGACGTTCCGGTACCT‑GTCCGTTTTCAGTGTCCAGCGGCATAAAACGAATGGCAAAACGGCTCTTATGTCCGGAAATTTG > NZ_CP009273/108277‑108447 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |