Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2145116	2145223	108	3 [2]	[2] 3	[yegJ]–[pphC]	[yegJ],[pphC]

GCGCGGGGATAAAATTTACGGCGGTTATACCATTGATCCTTTATTGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGCGGTTGAATTGT  >  NZ_CP009273/2145028‑2145168                                                                                        |                                                      gcgcgGGGATAAAATTTACGGCGGTTTTACCATTTATCCTTTTTTTTTTCCCCATCCCAAAAAAAAAAGCGACGAGCTAAAAGCaaaaat                                                     >  1:427824/1‑88 (MQ=255)      gggATAAAATTTACGGCGGTTATACCATTGATCCTTTATTGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTc                                                <  1:598458/90‑1 (MQ=255)                                                    cTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGCGGTTGAAttgt  <  2:925611/90‑1 (MQ=255)                                                                                        |                                                      GCGCGGGGATAAAATTTACGGCGGTTATACCATTGATCCTTTATTGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGCGGTTGAATTGT  >  NZ_CP009273/2145028‑2145168

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 5 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑