Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2068350	2068391	42	3 [2]	[2] 4	BW25113_RS10450	hypothetical protein

CTCATATTGCTGTGTCTGTTCGGCCCGGCCTTACTGGCTGGCTATATCACCGAACGCATAACCCGGTTGTTCCATATTCGCTGGCTGGCA  >  NZ_CP009273/2068362‑2068451                               |                                                            cTCATATTGCTGTGTCTGTTCGGCCCGGCCTTACTGGCTGGCTATATCACCGAACGCATAACCCGGTTGTTCCATATTCGCTGGCTGGCa  <  2:338711/90‑1 (MQ=255) cTCATATTGCTGTGTCTGTTCGGCCCGGCCTTACTGGCTGGCTATATCACCGAACGCATAACCCGGTTGTTCCATATTCGCTGGCTGGCa  <  2:944984/90‑1 (MQ=255)                               ttACTGGCTGGCTATATCACCGAACGCATAACCCGGTTGTTc                    >  1:933352/1‑42 (MQ=255)                               ttACTGGCTGGCTATATCACCGAACGCATAACCCGGTTGTTc                    <  2:933352/42‑1 (MQ=255)                               |                                                            CTCATATTGCTGTGTCTGTTCGGCCCGGCCTTACTGGCTGGCTATATCACCGAACGCATAACCCGGTTGTTCCATATTCGCTGGCTGGCA  >  NZ_CP009273/2068362‑2068451

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑