Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1003088	1003106	19	2 [1]	[1] 2	ycbX/rlmKL	6‑N‑hydroxylaminopurine resistance protein YcbX/bifunctional 23S rRNA (guanine(2069)‑N(7))‑methyltransferase RlmK/23S rRNA (guanine(2445)‑N(2))‑methyltransferase RlmL

AGACCAATGCCGCGCATCGATTTAACAGGATGAATAAAAAGCCGGATTAATGTCGCCACGGTGCGGTCCTCAAATGAAAATAAGCCCTCAACTTT  >  NZ_CP009273/1002998‑1003092                                                                                          |      aGACCAATGCCGCGCATCGATTTAACAGGATGAATAAAAAGCCGGATTAATGTCGCCACGGTGCGGTCCTCAAATGAAAATAAGCCCTCa       <  2:393326/90‑1 (MQ=255)      aaTGCCGCGCATCGATTTAACAGGATGAATAAAAAGCCGGATTAATGTCGCCACGGTGCGGTCCTCAAATGAAAATAAGCCCTCAACttt  >  2:118763/1‑90 (MQ=255)                                                                                          |      AGACCAATGCCGCGCATCGATTTAACAGGATGAATAAAAAGCCGGATTAATGTCGCCACGGTGCGGTCCTCAAATGAAAATAAGCCCTCAACTTT  >  NZ_CP009273/1002998‑1003092

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑