Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1070848	1070868	21	2 [0]	[1] 2	putA	trifunctional transcriptional regulator/proline dehydrogenase/L‑glutamate gamma‑semialdehyde dehydrogenase

CGGCCCCGGCAGCAATCGTTGTGTTCCTGCCTGCGCCAGCTCG  >  NZ_CP009273/1070805‑1070847                                           | cGGCCCCGGCAGCAATCGTTGTGTTCCTGCCTGCGCCAGCTCg  <  1:310917/43‑1 (MQ=255) cGGCCCCGGCAGCAATCGTTGTGTTCCTGCCTGCGCCAGCTCg  >  2:310917/1‑43 (MQ=255)                                           | CGGCCCCGGCAGCAATCGTTGTGTTCCTGCCTGCGCCAGCTCG  >  NZ_CP009273/1070805‑1070847

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑