Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	414663	414678	16	2 [1]	[0] 2	phoR/brnQ	phosphate regulon sensor histidine kinase PhoR/branched‑chain amino acid transporter carrier protein BrnQ

TGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTA  >  NZ_CP009273/414679‑414717 |                                       tGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTa  <  1:196822/39‑1 (MQ=255) tGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTa  >  2:196822/1‑39 (MQ=255) |                                       TGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTA  >  NZ_CP009273/414679‑414717

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑