Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1781854	1781858	5	2 [1]	[0] 2	ppsR	posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR

AGGATCAGATTGACGCAATTTATCACCAGACAGGCGTGCGCCCGCT  >  NZ_CP009273/1781859‑1781904 |                                              aGGATCAGATTGACGCAATTTATCACCAGACAGGCGTGCGCCCGCt  >  1:97583/1‑46 (MQ=255) aGGATCAGATTGACGCAATTTATCACCAGACAGGCGTGCGCCCGCt  <  2:97583/46‑1 (MQ=255) |                                              AGGATCAGATTGACGCAATTTATCACCAGACAGGCGTGCGCCCGCT  >  NZ_CP009273/1781859‑1781904

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑