Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | NZ_CP009273 | 3,754,231 | G→T | R127S (CGC→AGC) | selA ← | L‑seryl‑tRNA(Sec) selenium transferase |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NZ_CP009273 | 3,754,231 | 0 | G | T | 100.0% | 58.0 / NA | 17 | R127S (CGC→AGC) | selA | L‑seryl‑tRNA(Sec) selenium transferase |
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (7/10); total (7/10) |
CATTGTTATTGACGATACAGGCATCTTCCGCCCCCGTAATACGGCACAGCAGCTGCGCCAGCGCCCGATCGCGATGTCCGCGTCCGGCGTCGTCCAGATCATACTCGAGGGTCACTGGCGAACGCATAGCCTGCGCAACGGCTTCCACCGCGGCTTCCGCCTGTAAA > NZ_CP009273/3754150‑3754316 | cATTGTTATTGCCGATACAGGCATCGTCCGCCCCCGTAATACGGCGCAGCAGCTGCGCCAGCGCCCGATCGCGATGTCCGCTTCCGGcgt < 1:221803/90‑1 (MQ=255) cATTGTTATTGACGATACAGGCATCTTCCGCCCCCGTAATACGGCACAGCAGCTGCGCCAGCGCCCGATCGCGATGTCCGCTTCCGGcgt < 1:110664/90‑1 (MQ=255) cATTGTTATTGACGATACAGGCATCTTCCGCCCCCGTAATACGGCACAGCAGCTGCGCCAGCGCCCGATCGCGATGTCCGCTTCCGGcgt < 2:175158/90‑1 (MQ=255) aTTGACGATACAGGCATCTTCCGCCCCCGTAATACGGCACAGCAGCTGCGCCAGCGCCCGATCGCGATGTCCGCTTCCGGCGTCGTCCAg > 1:126220/1‑90 (MQ=255) gACGATACAGGCATCTTCCGCCCCCGTAATACGGCACAGCAGCTGCGCCAGCGCCCGATCGCGATGTCCGCTTCCGGCGTCGTCCAGATc < 1:91562/90‑1 (MQ=255) aCGATCCAGGCATCTTCCGCCCCCGTAAAACGGCCCATTAGGTGCGCCAGCGCCCGTTCGCGATGTCCGCTTCCGGCGTCGTCCAGATCa < 1:318466/90‑1 (MQ=255) aTACAGGCATCTTCCGCCCCCGTAATACGGCACAGCAGCTGCGCCAGCGCCCGATCGCGATGTCCGCTTCCGGCGTCGTCCAGATCa < 1:107232/87‑1 (MQ=255) aTACAGGCATCTTCCGCCCCCGTAATACGGCACAGCAGCTGCGCCAGCGCCCGATCGCGATGTCCGCTTCCGGCGTCGTCCAGATCa > 2:107232/1‑87 (MQ=255) aTACAGGCATCTTCCGCCCCCGTAATACGGCACAGCAGCTGCGCCAGCGCCCGATCCCGATGTCCGCTTCCGGCGTCGTCCAGATCATAc > 1:126228/1‑90 (MQ=255) gCCCCCGTAATACGGCACAGCAGCTGCGCCAGCGCCCGATCGCGATGTCCGCTTCCGGCGTCGTCCAGATCATACTCGAGGGTCACTGGc > 1:2200/1‑90 (MQ=255) ccccGTAATACGGCACAGCAGCTGCGCCAGCGCCCGATCGCGATGTCCGCTTCCGGCGTCGTCCAGATCATACTCGAGGGTCACTGGCGa < 1:18915/90‑1 (MQ=255) cGGCACAGCAGCTGCGCCAGCGCCCGATCGCGATGTCCGCTTCCGGCGTCGTCCAGATCATACTCGAGGGTCACTGGCGAACGCATAGcc < 2:140635/90‑1 (MQ=255) gcagcTGCGCCAGCGCCCGATCGCGATGCCCGCTCCCGGCGTCGCCCAGATCATCCTCGAGGGTCACTGGCGAACGCATAGCCTGCGCaa < 1:437373/90‑1 (MQ=255) gcCAGCGCCCGATCGCGATGTCCGCTTCCGGCGTCGTCCAGATCATACTCGAGGGTCACTGGCGAACGCATAGCCTGCGCAACGGCTTcc > 1:380633/1‑90 (MQ=255) cgcCCGATCGCGATGTCCGCTTCCGGCGTCGTCCAGATCATACTCGAGGGTCACTGGCGAACGCATAGCCTGCGCAACGGCTTCCACcgc < 2:407882/90‑1 (MQ=255) cGATCGCGATGTCCGCTTCCGGCGTCGTCCAGATCATACTCGAGGGTCACTGGCGAACGCATAGCCTGCGCAACGGCTTCCACCGCGGCt > 2:129338/1‑90 (MQ=255) ccGCTTCCGGCGTCGTCCAGATCATACTCGAGGGTCACTGGCGAACGCATAGCCTGCGCAACGGCTTCCACCGCGGCTTCCGCCTGTaaa > 1:204724/1‑90 (MQ=255) | CATTGTTATTGACGATACAGGCATCTTCCGCCCCCGTAATACGGCACAGCAGCTGCGCCAGCGCCCGATCGCGATGTCCGCGTCCGGCGTCGTCCAGATCATACTCGAGGGTCACTGGCGAACGCATAGCCTGCGCAACGGCTTCCACCGCGGCTTCCGCCTGTAAA > NZ_CP009273/3754150‑3754316 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |