Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3633314	3636186	2873	2 [1]	[0] 2	uspA–[rsmJ]	uspA,BW25113_RS26225,BW25113_RS26230,dtpB,[rsmJ]

TCAGGTTGTTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGATTGACGGATCATCCGGGTCGCTATAAGGTAAGGATGGTCTTAACACTGAATC  >  NZ_CP009273/3633224‑3633360                                                                                          |                                                tCAGGTTGTTTTTTTTCCAAAAGGTTAACCACTTTCACTATATTCAGGTCGAAAATTTGGTTATCTAACGAGTCAGCAAGGCGGATTGAc                                                 >  2:102914/1‑90 (MQ=255)                                                gTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGATTGACGGATCATCCGGGTCGCTATAAGGTAAGGATGGTCTTAACACTGAATc  >  1:105042/1‑90 (MQ=255)                                                                                          |                                                TCAGGTTGTTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGATTGACGGATCATCCGGGTCGCTATAAGGTAAGGATGGTCTTAACACTGAATC  >  NZ_CP009273/3633224‑3633360

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑