Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NZ_CP009273 3645177 3646509–3645391 215–1333 3 [1] [1] 2 [BW25113_RS18155]–[BW25113_RS18160] [BW25113_RS18155],[BW25113_RS18160]

AAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATA  >  NZ_CP009273/3645090‑3645200
                                                                                      |                        
aaaTTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTATTGCTGAACAACGAGCTg                          <  1:104890/86‑1 (MQ=255)
aaaTTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTATTGCTGAACAACGAGCTg                          >  2:104890/1‑86 (MQ=255)
                     tACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGata  >  2:468592/1‑90 (MQ=255)
                                                                                      |                        
AAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATA  >  NZ_CP009273/3645090‑3645200

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: