| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 1,855,234 | Δ1 bp | coding (356/1077 nt) | ydjL ← | zinc‑binding dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 1,855,231 | 0 | C | . | 100.0% | 54.3 / NA | 14 | coding (359/1077 nt) | ydjL | zinc‑binding dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base . (6/8); total (6/8) | |||||||||||
ATCAACACCATCAGGGATTTCCCACAACGCATGACGATGAATTTTGAGAATTTCACCAGGAACCAGACAATATTTGGAAAAACCACCGCCCCAGGTATTATTATCCAGACCAAGGTTTACTTTTTCTGTACAACACAGAAAATCACCTTGTTCACAGGCCGGACAAACAC > NZ_CP009273/1855143‑1855312 | aTCAACACCATCAGGGATTTCCCACAACGCATGACGATGAATTTTGAGAATTTCACCAGGAACCAGACAATATTTGGAAAAACCACCGcc < 1:166370/90‑1 (MQ=255) cAACACCATCAGGGATTTCCCACAACGCATGACGATGAATTTTGAGAATTTCACCAGGAACCAGACAATATTTGGAAAAACCACCGccca < 2:144351/90‑2 (MQ=255) acacCATCAGGGATTTCCCACAACGCATGACGATGAATTTTGAGAATTTCACCAGGAACCAGACAATATTTGGAAAAACCACCGcccagg > 2:466404/1‑87 (MQ=255) acacCATCAGGGATTTCCCACAACGCATGACGATGAATTTTGAGAATTTCACCAGGAACCAGACAATATTTGGAAAAACCACCGcccagg > 1:53461/1‑87 (MQ=255) aTCAGGGATTTCCCACAACGCATGACTATGAATTTTGAGAATTTCACCAGGAACCAGACAATATTTGGAAAAACCACCG‑CCCAGGtatta > 1:277535/1‑90 (MQ=255) ggATTTCCCACAACGCATGACGATGAATTTTGAGAATTTCACCAGGAACCAGACAATATTTGGAAAAACCACCG‑CCCAGGTATTATTATc > 1:571459/1‑90 (MQ=255) ttCCCACAACGCATGACGATGAATTTTGAGAATTTCACCAGGAACCAGACAATATTTGGAAAAACCACCG‑CCCAGGTATTATTATCCAGa > 1:503896/1‑90 (MQ=255) aCGCATGACGATGAATTTTGAGAATTTCACCAGGAACCAGACAATATTTGGAAAAACCACCG‑CCCAGGTATTATTATCCAGACCAAGGtt > 2:391713/1‑90 (MQ=255) aTGACGATGAATTTTGAGAATTTCACCAGGAACCAGACAATATTTGGAAAAACCACCG‑CCCAGGTATTATTATCCAGACCAAGGTTTACt < 1:5284/90‑1 (MQ=255) aTGAATTTTGAGAATTTCACCAGGAACCAGACAATATTTGGAAAAACCACCG‑CCCAGGTATTATTATCCAGACCAAGGTTTACTTTTTCt > 2:227959/1‑90 (MQ=255) aTTTTGAGAATTTCACCAGGAACCAGACAATATTTGGAAAAACCACCG‑CCCAGGTATTATTATCCAGACCAAGGTTTACTTTTTCTGTac < 2:53461/90‑1 (MQ=255) ttGAGAATTTCACCAGGAACCAGACAATATTTGGAAAAACCACCG‑CCCAGGTATTATTATCCAGACCAAGGTTTACTTTTTCTGTacaac < 2:33062/90‑1 (MQ=255) aGACAATATTTGGAAAAACCACCG‑CCCAGGTATTATTATCCAGACCAAGGTTTACTTTTTCTGTACAACACAGAAAATCACCTTGTTcac < 1:192744/90‑1 (MQ=255) atatTTGGAAAAACCACCG‑CCCAGGTATTATTATCCAGACCAAGGTTTACTTTTTCTGTACAACACAGAAAATCACCTTGTTCACAGGcc < 1:495286/90‑1 (MQ=255) atatTTGGAAAAACCACCG‑CCCAGGTATTATTATCCAGACCAAGGTTTACTTTTTCTGTACAACACAGAAAATCACCTTGTTCACAGGcc < 1:245791/90‑1 (MQ=255) aaaaaCCACCG‑CCCAGGTATTATTATCCAGACCAAGGTTTACTTTTTCTGTACAACACAGAAAATCACCTTGTTCACAGGCCGGACAAac < 2:241442/90‑1 (MQ=255) aaaaaCCACCG‑CCCAGGTATTATTATCCAGACCAAGGTTTACTTTTTCTGTACAACACAGAAAATCACCTTGTTCACAGGCCGGACAAac < 2:472133/90‑1 (MQ=255) aaaCCACCG‑CCCAGGTATTATTATCCAGACCAAGGTTTACTTTTTCTGTACAACACAGAAAATCACCTTGTTCACAGGCCGGACAAacac > 1:535371/1‑90 (MQ=255) | ATCAACACCATCAGGGATTTCCCACAACGCATGACGATGAATTTTGAGAATTTCACCAGGAACCAGACAATATTTGGAAAAACCACCGCCCCAGGTATTATTATCCAGACCAAGGTTTACTTTTTCTGTACAACACAGAAAATCACCTTGTTCACAGGCCGGACAAACAC > NZ_CP009273/1855143‑1855312 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |