| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 3,739,446 | A→G | intergenic (+5/‑8) | yiaN → / → yiaO | 2,3‑diketo‑L‑gulonate transporter large permease YiaN/2,3‑diketo‑L‑gulonate transporter substrate‑binding protein YiaO |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 3,739,446 | 0 | A | G | 100.0% | 58.7 / NA | 19 | intergenic (+5/‑8) | yiaN/yiaO | 2,3‑diketo‑L‑gulonate transporter large permease YiaN/2,3‑diketo‑L‑gulonate transporter substrate‑binding protein YiaO |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (5/14); total (5/14) | |||||||||||
CCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCTCCCTTTGAAATGGATTAATTAAAAGGAAAATATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTGGCGGCAC > NZ_CP009273/3739363‑3739529 | ccTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCTCCCTTTGAAATGGATTAATTAAAAGGGAAatat < 1:140540/90‑1 (MQ=255) cTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCTCCCTTTGAAATGGATTAATTAAAAGGGAAAtatt > 1:319074/1‑90 (MQ=255) ggTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCTCCCTTTGAAATGGATTAATTAAAAGGGAAAtattat < 1:414751/90‑1 (MQ=255) tataTTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCTCCCTTTGAAATGGATTAATTAAAAGGGAAATATTATGAAAt > 2:289406/1‑90 (MQ=255) ttCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCTCCCTTTGAAATGGATTAATTAAAAGGGAAATATTATGAAATTACg < 1:391762/90‑1 (MQ=255) ttCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCTCCCTTTGAAATGGATTAATTAAAAGGGAAATATTATGAAATTACg < 1:435807/90‑1 (MQ=255) tCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCTCCCTTTGAAATGGATTAATTAAAAGGGAAATATTATGAAATTACGc < 2:560484/90‑1 (MQ=255) tCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCTCCCTTTGAAATGGATTAATTAAAAGGGAAATATTATGAAATTACGc < 1:13015/90‑1 (MQ=255) tCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCTCCCTTTGAAATGGATTAATTAAAAGGGAAATATTATGAAATTACGc > 2:367664/1‑90 (MQ=255) tattaGTCGTATTTGTTTTTATTCCCGATCTCATCATCCTCCCTTTGAAATGGATTAATTAAAAGGGAAATATTATGAAATTACGCTCTg < 1:576657/90‑1 (MQ=255) gTCGTATTTGTTTTTATTCCCGATCTCATCATCCTCCCTTTGAAATGGATTAATTAAAAGGGAAATATTATGAAATTACGCTCTGTAAcc < 2:188623/90‑1 (MQ=255) tATTTGTTTTTATTCCCGATCTCATCATCCTCCCTTTGAAATGGATTAATTAAAAGGGAAATATTATGAAATTACGCTCTGTAACCTACg > 2:291758/1‑90 (MQ=255) ttGTTTTTATTCCCGATCTCATCATCCTCCCTTTGAAATGGATTAATTAAAAGGGAAATATTATGAAATTACGCTCTGTAACCTACGCat < 1:289406/90‑1 (MQ=255) tttATTCCCGATCTCATCATCCTCCCTTTGAAATGGATTAATTAAAAGGGAAATATTATGAAATTACGCTCTGTAACCTACGCATTATTc < 1:75633/90‑1 (MQ=255) catcatCCTCCCTTTGAAATGGATTAATTAAAAGGGAAATATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGctggcctggc > 1:559075/1‑90 (MQ=255) aaaaGGGAAATATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTGGCGGcac < 1:99082/90‑1 (MQ=255) aaaaGGGAAATATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTGGCGGcac < 1:554526/90‑1 (MQ=255) aaaaGGGAAATATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTGGCGGcac < 1:420870/90‑1 (MQ=255) aaaaGGGAAATATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTGGCGGcac < 2:382206/90‑1 (MQ=255) | CCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCTCCCTTTGAAATGGATTAATTAAAAGGAAAATATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTGGCGGCAC > NZ_CP009273/3739363‑3739529 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |