Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1206663	1206671	9	2 [0]	[1] 2	mcrA/BW25113_RS23640	5‑methylcytosine‑specific endonuclease McrA/isocitrate/isopropylmalate family dehydrogenase

AGTAAAAATGCAAAAGAACTAATCGAGATGCTTTACGTTAATATAAACCGATTACAGAAATAAAATTATTTATTAAAGTCACATTTAAGA  >  NZ_CP009273/1206573‑1206662                                                                                          | aGTAAAAATGCAAAAGAACTAATCGAGATGCTTTACGTTAATATAAACCGATTACAGAAATAAAATTATTTATTAAAGTCACATTTAAGa  <  1:28460/90‑1 (MQ=255) aGTAAAAATGCAAAAGAACTAATCGAGATGCTTTACGTTAATATAAACCGATTACAGAAATAAAATTATTTATTAAAGTCACATTTAAGa  <  1:62130/90‑1 (MQ=255)                                                                                          | AGTAAAAATGCAAAAGAACTAATCGAGATGCTTTACGTTAATATAAACCGATTACAGAAATAAAATTATTTATTAAAGTCACATTTAAGA  >  NZ_CP009273/1206573‑1206662

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑