Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NZ_CP009273 3633967 3634671 705 2 [0] [0] 2 BW25113_RS26225–[dtpB] BW25113_RS26225,BW25113_RS26230,[dtpB]

TACGACGTGTTCCTGAACGCCCGCATATGCGGGCGTTTTGCTTTTTGGCGCG  >  NZ_CP009273/3633915‑3633966
                                                   |
tACGACGTGTTCCTGAACGCCCGCATATGCGGGCGTTTTGCTTTTTGgcgcg  >  1:78223/1‑52 (MQ=255)
tACGACGTGTTCCTGAACGCCCGCATATGCGGGCGTTTTGCTTTTTGgcgcg  <  2:78223/52‑1 (MQ=255)
                                                   |
TACGACGTGTTCCTGAACGCCCGCATATGCGGGCGTTTTGCTTTTTGGCGCG  >  NZ_CP009273/3633915‑3633966

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: