Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3631794	3631942	149	2 [1]	[1] 3	pitA	inorganic phosphate transporter PitA

CCGTCGAATACCATTAACGCGCTCAACCGCCTGAAAGGTATGTTGACCACCGATGTGGAAAGCTACGACAAGCTGTCGCTTGATCAACGT  >  NZ_CP009273/3631923‑3632012                     |                                                                      ccGTCGAATACCATTAACGCGCTCAACCGCCTGAAAGGTATGTTGACCACCGATGTGGAAAGCTACGACAAGCTGTCGCTTGATCAACGt  <  2:513975/90‑1 (MQ=255)                     gcTCAACCGCCTGAAAGGTATGTTGACCACCGATGTGGAAAGCTACGACa                      >  1:35909/1‑50 (MQ=255)                     gcTCAACCGCCTGAAAGGTATGTTGACCACCGATGTGGAAAGCTACGACa                      <  2:35909/50‑1 (MQ=255)                     |                                                                      CCGTCGAATACCATTAACGCGCTCAACCGCCTGAAAGGTATGTTGACCACCGATGTGGAAAGCTACGACAAGCTGTCGCTTGATCAACGT  >  NZ_CP009273/3631923‑3632012

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑