Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	718068	718080	13	3 [1]	[1] 2	kdpD	two‑component system sensor histidine kinase KdpD

GCGCTGCTGTTCCGGGATCATCAACTGGCGCAGATTCCCCGGCTCCACCACCACCAGCCCGTAGGTTTTCTCGCCGCTTTTTAGCGGCAA  >  NZ_CP009273/717984‑718073                                                                                    |       gcgcTGCTGTTCCGGGATCATCAACTGGCGCAGATTCCCCGGCTCCACCACCACCAGCCCGTAGGTTTTCTCGCCGCTTTTTAGCGGCaa  <  2:30494/90‑1 (MQ=255)                                             ccaccaccaccaGCCCGTAGGTTTTCTCGCCGCTTTTTAg        >  1:219243/1‑40 (MQ=255)                                             ccaccaccaccaGCCCGTAGGTTTTCTCGCCGCTTTTTAg        <  2:219243/40‑1 (MQ=255)                                                                                    |       GCGCTGCTGTTCCGGGATCATCAACTGGCGCAGATTCCCCGGCTCCACCACCACCAGCCCGTAGGTTTTCTCGCCGCTTTTTAGCGGCAA  >  NZ_CP009273/717984‑718073

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑