| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 1,425,126 | G→C | W607C (TGG→TGC) | stfR → | prophage tail fiber N‑terminal domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 1,425,126 | 0 | G | C | 100.0% | 58.0 / NA | 20 | W607C (TGG→TGC) | stfR | prophage tail fiber N‑terminal domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base C (10/10); total (10/10) | |||||||||||
CGATCCGATGAATAACTGCGAGTTTAACGGATTTGTTATGCCTGGTGGCTGGACTGACAGGGGGCGTTATGCTTATGGCATGTTCTGGCAATATCAAAACAATGAACGAGCCATTCACTCAATAATGATGAGTAATAAGGGCGATGATTTGCGCTCTGTGTTCTATGTTG > NZ_CP009273/1425039‑1425208 | tgctCCGCTGAATAACTGCGCTTCTACCGGATTTTTTATGCCTGGTGGCTCGAATGCCAGGGTTCCTTATTCTTACGGCATCTTCTGCCa < 1:364089/87‑1 (MQ=255) aaCTGCGAGTTTAACGGATTTGTTATGCCTGGTGGCTGGACTGACAGGGGGCGTTATGCTTATGGCATGTTCTGCCAATATCAAAACAAt > 1:389710/1‑90 (MQ=255) gCGAGTTTAACGGATTTGTTATGCCTGGTGGCTGGACTGACAGGGGGCGTTATGCTTATGGCATGTTCTGCCAATATCAAAACAATGAAc > 2:349287/1‑90 (MQ=255) ggATTTGTTATGCCTGGTGGCTGGACTGACAGGGGGCGTTATGCTTATGGCATGTTCTGCCAATATCAAAACAATGAACGAGCCATTCAc < 2:220334/90‑1 (MQ=255) aTTTGTTATGCCTGGTGGCTGGACTGACAGGGGGCGTTATGCTTATGGCATGTTCTGCCAATATCAAAACAATGAACGAGCCATTCACTc < 1:330536/90‑1 (MQ=255) aTTTGTTATGCCTGGTGGCTGGACTGACAGGGGGCGTTATGCTTATGGCATGTTCTGCCAATATCAAAACAATGAACGAGCCATTCACTc < 2:545541/90‑1 (MQ=255) gCCTGGTGGCTGGACTGACAGGGGGCGTTATGCTTATGGCATGTTCTGCCAATATCAAAACAATGAACGAGCCATTCACTCAATAatgat > 1:166769/1‑90 (MQ=255) ccTGGTGGCTGGACTGACAGGGGGCGTTATGTTTATGGCATGTTCTGCCAATATC‑AAACAATGACCGAGCCATTCACTCAATAAtgatga < 1:283275/90‑1 (MQ=255) tggtggCTGGACTGACAGGGGGCGTTATGCTTATGGCATGTTCTGCCAATATCAAAACAATGAACGAGCCATTCACTCAATAATGATGAg > 2:169461/1‑90 (MQ=255) gtggCTGGACTGACAGGGGGCGTTATGCTTATGGCATGTTCTGCCAATATCAAAACAATGAACGAGCCATTCACTCAATAAtgatga > 2:570064/1‑87 (MQ=255) gtggCTGGACTGACAGGGGGCGTTATGCTTATGGCATGTTCTGCCAATATCAAAACAATGAACGAGCCATTCACTCAATAAtgatga < 1:570064/87‑1 (MQ=255) gtggCTGGACTGACAGGGGGCGTTATGCTTATGGCATGTTCTGCCAATATCAAAACAATGAACGAGCCATTCACTCAATAATGATGAGta > 2:289490/1‑90 (MQ=255) cTGGACTGACAGGGGGCGTTATGCTTATGGCATGTTCTGCCAATATCAAAACAATGAACGAGCCATTCACTCAATAATGATGAGtaataa > 1:348056/1‑90 (MQ=255) aCAGGGGGCGTTATGCTTATGGCATGTTCTGCCAATATCAAAACAATGAACGAGCCATTCACTCAATAATGATGAGTAATAAGGGCgatg < 1:87019/90‑1 (MQ=255) aCAGGGGGCGTTATGCTTATGGCATGTTCTGCCAATATCAAAACAATGAACGAGCCATTCACTCAATAATGATGAGTAATAAGGGCgatg < 1:349287/90‑1 (MQ=255) gTTATGCTTATGGCATGTTCTGCCAATATCAAAACAATGAACGAGCCATTCACTCAATAATGATGAGTAATAAGGGCGATGATTTGCGct > 2:581282/1‑90 (MQ=255) ttATGCTTATGGCATGTTCTGCCAATATCAAAACAATGAACGAGCCATTCACTCAATAATGATGAGTAATAAGGGCGATGATTTGCGctc < 1:540016/90‑1 (MQ=255) aTGCTTATGGCATGTTCTGCCAATATCAAAACAATGAACGAGCCATTCACTCAATAATGATGAGTAATAAGGGCGATGATTTGCGCTCtg < 1:374624/90‑1 (MQ=255) tATGGCATGTTCTGCCAATATCAAAACAATGAACGAGCCATTCACTCAATAATGATGAGTAATAAGGGCGATGATTTGCGCTCTGTGTTc > 2:104286/1‑90 (MQ=255) tGTTCTGCCAATATCAAAACAATGAACGAGCCATTCACTCAATAATGATGAGTAATAAGGGCGATGATTTGCGCTCTGTGTTCTATGTTg > 2:47131/1‑90 (MQ=255) | CGATCCGATGAATAACTGCGAGTTTAACGGATTTGTTATGCCTGGTGGCTGGACTGACAGGGGGCGTTATGCTTATGGCATGTTCTGGCAATATCAAAACAATGAACGAGCCATTCACTCAATAATGATGAGTAATAAGGGCGATGATTTGCGCTCTGTGTTCTATGTTG > NZ_CP009273/1425039‑1425208 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |