| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 2,635,419 | T→C | D262G (GAT→GGT) | rodZ ← | cytoskeleton protein RodZ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 2,635,419 | 0 | T | C | 100.0% | 72.5 / NA | 24 | D262G (GAT→GGT) | rodZ | cytoskeleton protein RodZ |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (13/11); total (13/11) | |||||||||||
TGGCCGGTTAAGTTCAAATTACCGTCTTTACGCTGCATACCGCTAAACAATTTTTTACCGGTAGCATCAGTGACCTCCAGCCAGCAATCGGCAGTAAAGTTCATCACCAGCGCATTCGGATCAGCCACCGGCGTGGTCACGCCAGCCTGATCGGTTGGCAACGGCGCAGCAC > NZ_CP009273/2635332‑2635503 | tGGCCGGTTAAGTTCAAATTACCGTCTTTACGCTGCATACCGCTAAACAATTTTTTACCGGTAGCATCAGTGACCTCCAGCCAGCAACCg > 1:197687/1‑90 (MQ=255) ttAAGTTCAAATTACCGTCTTTACGCTGCATACCGCTAAACAATTTTTTACCGGTAGCATCAGTGACCTCCAGCCAGCAACCGGCAGTaa < 1:168665/90‑1 (MQ=255) tAAGTTCAAATTACCGTCTTTACGCTGCATACCGCTAAACAATTTTTTACCGGTAGCATCAGTGACCTCCAGCCAGCAACCGGCAGTaaa < 2:123968/90‑1 (MQ=255) aaTTACCGTCTTTACGCTGCATACCGCTAAACAATTTTTTACCGGTAGCATCAGTGACCTCCAGCCAGCAACCGGCAGTAAAGTtcatca > 2:120933/1‑90 (MQ=255) tttACGCTGCATACCGCTAAACAATTTTTTACCGGTAGCATCAGTGACCTCCAGCCAGCAACCGGCAGTAAAGTTCATCACCAGCGCAtt < 1:326387/90‑1 (MQ=255) ttACGCTGCATACCGCTAAACAATTTTTTACCGGTAGCATCAGTGACCTCCAGCCAGCAACCGGCAGTAAAGTTCATCACCAGCGCATTc < 1:191243/90‑1 (MQ=255) aCGCTGCATACCGCTAAACAATTTTTTACCGGTAGCATCAGTGACCTCCAGCCAGCAACCGGCAGTAAAGTTCATCACCAGCGCATTCgg < 2:109255/90‑1 (MQ=255) gCATACCGCTAAACAATTTTTTACCGGTAGCATCAGTGACCTCCAGCCAGCAACCGGCAGTAAAGTTCATCACCAGCGCATTCGGATCAg > 2:282612/1‑90 (MQ=255) gCATACCGCTAAACAATTTTTTACCGGTAGCATCAGTGACCTCCAGCCAGCAACCGGCAGTAAAGTTCATCACCAGCGCATTCGGATCAg > 1:45834/1‑90 (MQ=255) gCTAAACAATTTTTTACCGGTAGCATCAGTGACCTCCAGCCAGCAACCGGCAGTAAAGTtc < 2:453247/61‑1 (MQ=255) gCTAAACAATTTTTTACCGGTAGCATCAGTGACCTCCAGCCAGCAACCGGCAGTAAAGTtc > 1:453247/1‑61 (MQ=255) aaaCAATTTTTTACCGGTAGCATCAGTGACCTCCAGCCAGCAACCGGCAGTAAAGTTCATCACCAGCGCATTCGGATCAGCCACCGGCGt > 1:387272/1‑90 (MQ=255) aaaCAATTTTTTACCGGTAGCATCAGTGACCTCCAGCCAGCAACCGGCAGTAAAGTTCATCACCAGCGCATTCGGATCAGCCACCGGCGt > 1:116534/1‑90 (MQ=255) aaaCAATTTTTTACCGGTAGCATCAGCGACCTCCAGCCAGCAACCGGCAGTAAAGTTCATCACCAGCGCATTCGGATCAGCCACCGGCGt > 1:237087/1‑90 (MQ=255) aTTTTTTACCGGTAGCATCAGTGACCTCCAGCCAGCAACCGGCAGTAAAGTTCATCACCAGCGCATTCGGATCAGCCACCGGCGTGGTCa > 1:449349/1‑90 (MQ=255) aTTTTTTACCGGTAGCATCAGTGACCTCCAGCCAGCAACCGGCAGTAAAGTTCATCACCAGCGCATTCGGATCAGCCACCGGCGTGGTCa > 2:169434/1‑90 (MQ=255) cATCAGTGACCTCCAGCCAGCAACCGGCAGTAAAGTTCATCACCAGCGCATTCGGATCAGCCACCGGCGTGGTCACGCCAGCCTGATCgg < 2:279495/90‑1 (MQ=255) aCCTCCAGCCAGCAACCGGCAGTAAAGTTCATCACCAGCGCATTCGGATCAGCCACCGGCGTGGTCACGCCAGCCTGATCGGTTGGCAAc < 1:433728/90‑1 (MQ=255) aCCTCCAGCCAGCAACCGGCAGTAAAGTTCATCACCAGCGCATTCGGATCAGCCACCGGCGTGGTCACGCCAGCCTGATCGGTTGGCAAc < 1:282612/90‑1 (MQ=255) aCCTCCAGCCAGCAACCGGCAGTAAAGTTCATCACCAGCGCATTCGGATCAGCCACCGGCGTGGTCACGCCAGCCTGATCGGTTGGCAAc < 1:209247/90‑1 (MQ=255) ccagccagCAACCGGCAGTAAAGTTCATCACCAGCGCATTCGGATCAGCCACCGGCGTGGTCACGCCAGCCTGATCGGTTGGCAACGgcg > 1:194282/1‑90 (MQ=255) gccagcAACCGGCAGTAAAGTTCATCACCAGCGCATTCGGATCAGCCACCGGCGTGGTCACGCCAGCCTGATCGGTTGGCAACGGCgcag > 2:79597/1‑90 (MQ=255) cagcAACCGGCAGTAAAGTTCATCACCAGCGCATTCGGATCAGCCACCGGCGTGGTCACGCCAGCCTGATCGGTTGGCAACGGCgcagca > 1:382981/1‑90 (MQ=255) agcAACCGGCAGTAAAGTTCATCACCAGCGCATTCGGATCAGCCACCGGCGTGGTCACGCCAGCCTGATCGGTTGGCAACGGCGCAGCAc < 2:116534/90‑1 (MQ=255) | TGGCCGGTTAAGTTCAAATTACCGTCTTTACGCTGCATACCGCTAAACAATTTTTTACCGGTAGCATCAGTGACCTCCAGCCAGCAATCGGCAGTAAAGTTCATCACCAGCGCATTCGGATCAGCCACCGGCGTGGTCACGCCAGCCTGATCGGTTGGCAACGGCGCAGCAC > NZ_CP009273/2635332‑2635503 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |