| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 3,834,360 | G→C | A247G (GCG→GGG) | nepI ← | purine ribonucleoside efflux pump NepI |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 3,834,360 | 0 | G | C | 100.0% | 56.1 / NA | 19 | A247G (GCG→GGG) | nepI | purine ribonucleoside efflux pump NepI |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base C (7/12); total (7/12) | |||||||||||
AGAATGAACGACGAAAGCGACGTACCAATAAAGCTGGCGATACCAAAACTCAACAGCACCAGCGTTAAGCCATCCACGCCGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGATGGCGATCATCCCTGCCATC > NZ_CP009273/3834273‑3834446 | aGAATGAACAACGAAAGCGACGTACCAATAAAGCTGGCGACACCAAAACTCAACAGCACCAGCGTTAAGCCATCCACGCCGAATcccccc < 2:210459/90‑1 (MQ=255) tGAACGACGAAAGCGACGTACCAATAAAGCTGGCGATACCAAAACTCAACAGCACCAGCGTTAAGCCATCCACGCCGAATCCCCCCAGGt < 1:358066/90‑1 (MQ=255) tGAACGACGAAAGCGACGTACCAATAAAGCTGGCGATACCAAAACTCAACAGCACCAGCGTTAAGCCATCCACGCCGAATCCCCCCAGGt < 1:398002/90‑1 (MQ=255) tGAACGACGAAAGCGACGTACCAATAAAGCTGGCGATACCAAAACTCAACAGCACCAGCGTTAAGCCATCCACGCCGAATCCCCCCAGGt < 1:417612/90‑1 (MQ=255) tGAACGACGAAAGCGACGTACCAATAAAGCTGGCGATACCAAAACTCAACAGCACCAGCGTTAAGCCATCCACGCCGAATCCCCCCAGGt < 2:206052/90‑1 (MQ=255) tGAACGACGAAAGCGACGTACCAATAAAGCTGGCGATACCAAAACTCAACAGCACCAGCGTTAAGCCATCCACGCCGAATCCCCCCAGGt < 2:124572/90‑1 (MQ=255) acgaAAGCGACGTACCAATAAAGCTGGCGATACCAAAACTCAACAGCACCAGCGTTAAGCCATCCACGCCGAATCCCCCCAGGTTCatat < 1:265120/90‑1 (MQ=255) aGCGACGTACCAATAAAGCTGGCGATACCAAAACTCAACAGCACCAGCGTTAAGCCATCCACGCCGAATCCCCCCAGGTTCATATACAcc < 2:254383/90‑1 (MQ=255) gACGTACCAATAAAGCTGGCGATACCAAAACTCAACAGCACCAGCGTTAAGCCATCCACGCCGAATCCCCCCAGGTTCATATACACCggg < 1:169832/90‑1 (MQ=255) tGGCGATACCAAAACTCAACAGCACCAGCGTTAAGCCATCCACGCCGAATCCCCCCAGGTTCATATACACCGGGCGAATATACGTgaaga > 1:116664/1‑90 (MQ=255) gCGATACCAAAACTCAACAGCACCAGCGTTAAGCCATCCACGCCGAATCCCCCCAGGTTCATATACACCGGGCGAATATACGTGAAGaaa > 2:52452/1‑90 (MQ=255) cAGCACCAGCGTTAAGCCATCCACGCCGAATCCCCCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGaa < 2:81587/90‑1 (MQ=255) gCACCAGCGTTAAGCCATCCACGCCGAATCCCCCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAg > 2:205669/1‑90 (MQ=255) gCACCAGCGTTAAGCCATCCACGCCGAATCCCCCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAg > 1:284391/1‑90 (MQ=255) cATCCACGCCGAATCCCCCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGATGGCGa > 2:404645/1‑90 (MQ=255) aTCCACGCCGAATCCCCCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGATGGCggt > 1:56967/1‑88 (MQ=255) aCGCCGAATCCCCCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGATGGCGatcatc < 1:404645/90‑1 (MQ=255) cGAATCCCCCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGATGGCGATCATCCCTg < 2:94803/90‑1 (MQ=255) cGAATCCCCCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGATGGCGATCATCCCTg < 1:5160/90‑1 (MQ=255) aaTCCCCCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGATGGCGATCATCCCTGcc > 1:468678/1‑90 (MQ=255) ccccccAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGATGGCGATCATCCCTGCCATc < 1:23632/90‑1 (MQ=255) | AGAATGAACGACGAAAGCGACGTACCAATAAAGCTGGCGATACCAAAACTCAACAGCACCAGCGTTAAGCCATCCACGCCGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGATGGCGATCATCCCTGCCATC > NZ_CP009273/3834273‑3834446 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |