Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | NZ_CP009273 | 1,119,379 | A→G | G44G (GGT→GGC) | grxB ← | glutaredoxin 2 |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NZ_CP009273 | 1,119,379 | 0 | A | G | 100.0% | 16.5 / NA | 7 | G44G (GGT→GGC) | grxB | glutaredoxin 2 |
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (4/3); total (4/3) |
TTATCGACATAGTGAACGATGTCCATGCTTTCTGGCATATAGCGGCTGTCATCTTTTTGCAGAATGGGAACCTGTTTTTGACCGACCATCCGGGTGGGTGTTTCTGCGTCGTCGTTGAGCAGAACATGTAATTCGACGGGGATATTTTTCAGGCCGAAAATCA > NZ_CP009273/1119299‑1119461 | ttATCGACATAGTGAACGATGTCCATGCTTTCTGGCATATAGCGGCTGTCATCTTTTTGCAGAATGGGAACCTGTTTTTGGCCGACCATc < 1:209650/90‑1 (MQ=255) tGAACGATGTCCATGCTTTCTGGCATATAGCGGCTGTCATCTTTTTGCAGAATGGGAACCTGTTTTTGGCCGACCATCCGGGGGGGTGtt > 2:39057/1‑90 (MQ=255) tGCTTTCTGGCATATAGCGGCTGTCATCTTTTTGCAGAATGGGAACCTGTTTTTGGCCGACCATCCGGGTGGGTGTTTCTGcgtcgtcgt < 1:439836/90‑1 (MQ=255) tttCTGGCATATAGCGGCTGTCATCTTTTTGCAGAATGGGAACCTGTTTTTGGCCGACCATCCGGGTGGGTGTTTCTGCGTCGTCGTTGa > 2:13320/1‑90 (MQ=255) tCTGGCATATAGCGGCTGTCATCTTTTTGCAGAATGGGAACCTGTTTTTGGCCGACCATCCGGGTGGGTGTTTCTGCGTCGTCGTTGAGc < 2:180863/90‑1 (MQ=255) gCGGCTGTCATCTTTTTGCAGAATGGGAACCTGTTTTTGGCCGACCATCCGGGTGGGTGTTTCTGCGTCGTCGTTGAGCAGAACATGTaa > 2:215529/1‑90 (MQ=255) gTTTTTGGCCGACCATCCGGGTGGGTGTTTCTGCGTCGTCGTTGAGCAGAACATGTAATTCGACGGGGATATTTTTCAGGCCGAAAATCa > 1:225238/1‑90 (MQ=255) | TTATCGACATAGTGAACGATGTCCATGCTTTCTGGCATATAGCGGCTGTCATCTTTTTGCAGAATGGGAACCTGTTTTTGACCGACCATCCGGGTGGGTGTTTCTGCGTCGTCGTTGAGCAGAACATGTAATTCGACGGGGATATTTTTCAGGCCGAAAATCA > NZ_CP009273/1119299‑1119461 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |