Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	774668	774710	43	5 [1]	[1] 2	pal	peptidoglycan‑associated lipoprotein Pal

TTGCGGCATGTTCTTCCAACAAGAACGCCAGCAATGACGGCAGCGAAGGCATGCTGGGTGCCGGCACTGGTATGGATGCGAACGGCGGCAACGGCAACATGTCTT  >  NZ_CP009273/774578‑774682                                                                                          |                ttGCGGCATGTTCTTCCAACAAGAACGCCAGCAATGACGGCAGCGAAGGCATGCTGGGTGCCGGCACTGGTATGGATGCGAACGGcggca                 >  1:145265/1‑90 (MQ=255) ttGCGGCATGTTCTTCCAACAAGAACGCCAGCAATGACGGCAGCGAAGGCATGCTGGGTGCCGGCACTGGTATGGATGCGAACGGcggca                 >  1:334496/1‑90 (MQ=255) ttGCGGCATGTTCTTCCAACAAGAACGCCAGCAATGACGGCAGCGAAGGCATGCTGGGTGCCGGCACTGGTATGGATGCGAACGGcggca                 >  2:87631/1‑90 (MQ=255) ttGCGGCATGTTCTTCCAACAAGAACGCCAGCAAGGACGGCAGCGAAGGCATGCTGGGGGCCGGCAGTGGTATGGATGCGAACGGcggca                 >  2:323428/1‑90 (MQ=255)                ccAACAAGAACGCCAGCAATGACGGCAGCGAAGGCATGCTGGGTGCCGGCACTGGTATGGATGCGAACGGCGGCAACGGCAACATGTCtt  <  1:62941/90‑1 (MQ=255)                                                                                          |                TTGCGGCATGTTCTTCCAACAAGAACGCCAGCAATGACGGCAGCGAAGGCATGCTGGGTGCCGGCACTGGTATGGATGCGAACGGCGGCAACGGCAACATGTCTT  >  NZ_CP009273/774578‑774682

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑