Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	999399	999444	46	2 [1]	[0] 2	ycbF	fimbrial chaperone

AAGGTGCCATTAACTTTTTATGCGCAATTGCGACCTGTCAATAGCGATGTGCAGTCGGGTAAAGTGAATGCCAGCGCGACATTTGTACTTCATTATGACTAATACGTGGAAC  >  NZ_CP009273/999309‑999420                                                                                          |                       aaGGTGCCATTAACTTTTTATGCGCAATTGCGACCTGTCAATAGCGATGTGCAGTCGGGTAAAGTGAATGCCAGCGCGACATTTGTACtt                        >  2:321178/1‑90 (MQ=255)                       cgcAATTGCGACCTGTCAATAGCGATGTGCAGTCGGGTAAAGTGAATGCCAGCGCGACATTTGTACTTCATTATGACTAATACGTGGAAc  <  2:266819/90‑1 (MQ=255)                                                                                          |                       AAGGTGCCATTAACTTTTTATGCGCAATTGCGACCTGTCAATAGCGATGTGCAGTCGGGTAAAGTGAATGCCAGCGCGACATTTGTACTTCATTATGACTAATACGTGGAAC  >  NZ_CP009273/999309‑999420

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑