Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1041923	1041938	16	2 [1]	[1] 3	gfcD	YjbH domain‑containing protein

ATAGAAACCATTGCCTAAGTCAGCAAAATAGTTCGCCTGCAAGTTGTTGAGATAAACGTCATTGCGAACGTAGTCACGGATATGCGTGCGCACGC  >  NZ_CP009273/1041833‑1041927                                                                                          |      aTAGAAACCATTGCCTAAGTCAGCAAAATAGTTCGCCTGCAAGTTGTTGAGATAAACGTCATTGCGAACGTAGTCACGGATAtgcgtgcg       >  2:325463/1‑90 (MQ=255)      aaCCATTGCCTAAGTCAGCAAAATAGTTCGCCTGCAAGTTGTTGAGATAAACGTCATTGCGAACGTAGTCACGGATATGCGTGCGCAcgc  <  1:102262/90‑1 (MQ=255)                                                                                          |      ATAGAAACCATTGCCTAAGTCAGCAAAATAGTTCGCCTGCAAGTTGTTGAGATAAACGTCATTGCGAACGTAGTCACGGATATGCGTGCGCACGC  >  NZ_CP009273/1041833‑1041927

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑