BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1615933	284 (0.950)	5 (0.020)	3/194	27.0	1.9%	coding (882/1191 nt)	ydeA	arabinose efflux transporter, arabinose‑inducible
*	?	NC_000913	= 2945543	241 (0.820)	5 (0.020)	3/194	27.0	1.9%	noncoding (25/77 nt)	metW	tRNA‑Met
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 284 total aligned reads displayed.

CGTGATTTTCGGTAAACTGGGTAATCAGTATGCGTCTGCGTTGGTGAGTACGGCGATTGCGCTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTATTTTCTGGGGGATCGCGATGATGATCATCGGGCTTGGTATGCAGGTTAAAGTGCTGGCGCTGGCA  >  NC_000913/1615837‑1616032

  tGATTTTCGGTAAACTGGGTAATCAGTATGCGTCTGCGTTGGTGAGTACGGCGATTGCGCTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGaa                                                                                                >  2:2976214/1‑100 (MQ=255)

  tGATTTTCGGTAAACTGGGTAATCAGTATGCGTCTGCGTTGGTGAGTACGGCGATTGCGCTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGaa                                                                                                >  1:1948153/1‑100 (MQ=255)

    aTTTTCGGTAAACTGGGTAATCAGTATGCGTCTGCGTTGGTGAGTACGGCGATTGCGCTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACa                                                                                              >  1:4427502/1‑100 (MQ=255)

    aTTTTCGGTAAACTGGGTAATCAGTATGCGTCTGCGTTGGTGAGTACGGCGATTGCGCTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACa                                                                                              >  1:1793595/1‑100 (MQ=255)

     ttttCGGTAAACTGGGTAATCAGTATGCGTCTGCGTTGGTGAGTACGGCGATTGCGCTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAg                                                                                             <  2:4176425/100‑1 (MQ=255)

      tttCGGTAAACTGGGTAATCAGTATGCGTCTGCGTTGGTGAGTACGGCGATTGCGCTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGt                                                                                            <  2:636741/100‑1 (MQ=255)

       ttCGGTAAACTGGGTAATCAGTATGCGTCTGCGTTGGTGAGTACGGCGATTGCGCTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTg                                                                                           <  2:698777/100‑1 (MQ=255)

        tCGGTAAACTGGGTAATCAGTATGCGTCTGCGTTGGTGAGTACGGCGATTGCGCTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGa                                                                                          >  1:5824277/1‑100 (MQ=255)

           gTAAACTGGGTAATCAGTATGCGTCTGCGTTGGTGAGTACGGCGATTGCGCTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAAt                                                                                       >  1:5133653/1‑100 (MQ=255)

            tAAACTGGGTAATCAGTATGCGTCTGCGTTGGTGAGTACGGCGATTGCGCTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATa                                                                                      >  2:608460/1‑100 (MQ=255)

            tAAACTGGGTAATCAGTATGCGTCTGCGTTGGTGAGTACGGCGATTGCGCTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATa                                                                                      >  1:2207556/1‑100 (MQ=255)

            tAAACTGGGTAATCAGTATGCGTCTGCGTTGGTGAGTACGGCGATTGCGCTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATa                                                                                      <  2:2128596/100‑1 (MQ=255)

              aaCTGGGTAATCAGTATGCGTCTGCGTTGGTGAGTACGGCGATTGCGCTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATaca                                                                                    >  2:4430775/1‑100 (MQ=255)

                cTGGGTAATCAGTATGCGTCTGCGTTGGTGAGTACGGCGATTGCGCTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACAcc                                                                                  >  1:577225/1‑100 (MQ=255)

                cTGGGTAATCAGTATGCGTCTGCGTTGGTGAGTACGGCGATTGCGCTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACAcc                                                                                  >  2:5249887/1‑100 (MQ=255)

                cTGGGTAATCAGTATGCGTCTGCGTTGGTGAGTACGGCGATTGCGCTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACAcc                                                                                  >  1:625157/1‑100 (MQ=255)

                 tGGGTAATCAGTATGCGTCTGCGTTGGTGAGTACGGCGATTGCGCTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCt                                                                                 <  1:4799736/100‑1 (MQ=255)

                  gggTAATCAGTATGCGTCTGCGTTGGTGAGTACGGCGATTGCGCTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTc                                                                                >  2:6456153/1‑100 (MQ=255)

                   ggTAATCAGTATGCGTCTGCGTTGGTGAGTACGGCGATTGCGCTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCg                                                                               >  1:5995927/1‑100 (MQ=255)

                    gTAATCAGTATGCGTCTGCGTTGGTGAGTACGGCGATTGCGCTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCgg                                                                              <  1:4189886/100‑1 (MQ=255)

                    gTAATCAGTATGCGTCTGCGTTGGTGAGTACGGCGATTGCGCTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCgg                                                                              >  1:3917338/1‑100 (MQ=255)

                      aaTCAGTATGCGTCTGCGTTGGTGAGTACGGCGATTGCGCTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCgggg                                                                            <  2:2837701/100‑1 (MQ=255)

                       aTCAGTATGCGTCTGCGTTGGTGAGTACGGCGATTGCGCTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCggggg                                                                           >  2:2551302/1‑99 (MQ=255)

                          aGTATGCGTCTGCGTTGGTGAGTACGGCGATTGCGCTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCt                                                                        <  1:5247620/100‑1 (MQ=255)

                          aGTATGCGTCTGCGTTGGTGAGTACGGCGATTGCGCTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCt                                                                        <  2:5794824/100‑1 (MQ=255)

                          aGTATGCGTCTGCGTTGGTGAGTACGGCGATTGCGCTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCt                                                                        >  1:7074473/1‑100 (MQ=255)

                             aTGCGTCTGCGTTGGTGAGTACGGCGATTGCGCTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAg                                                                     <  2:4306280/100‑1 (MQ=255)

                             aTGCGTCTGCGTTGGTGAGTACGGCGATTGCGCTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAg                                                                     >  1:1929773/1‑100 (MQ=255)

                             aTGCGTCTGCGTTGGTGAGTACGGCGATTGCGCTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAg                                                                     >  1:4739320/1‑100 (MQ=255)

                                cGTCTGCGTTGGTGAGTACGGCGATTGCGCTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTAt                                                                  <  1:2494836/100‑1 (MQ=255)

                                cGTCTGCGTTGGTGAGTACGGCGATTGCGCTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTAt                                                                  <  2:3654373/100‑1 (MQ=255)

                                 gTCTGCGTTGGTGAGTACGGCGATTGCGCTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTAtt                                                                 <  2:1357645/100‑1 (MQ=255)

                                  tCTGCGTTGGTGAGTACGGCGATTGCGCTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTAttt                                                                >  2:1840446/1‑100 (MQ=255)

                                  tCTGCGTTGGTGAGTACGGCGATTGCGCTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTAttt                                                                <  1:5164629/100‑1 (MQ=255)

                                   cTGCGTTGGTGAGTACGGCGATTGCGCTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTAtttt                                                               >  2:4072210/1‑100 (MQ=255)

                                   cTGCGTTGGTGAGTACGGCGATTGCGCTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTAtttt                                                               <  1:3568622/100‑1 (MQ=255)

                                   cTGCGTTGGTGAGTACGGCGATTGCGCTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTAtttt                                                               >  1:314593/1‑100 (MQ=255)

                                    tGCGTTGGTGAGTACGGCGATTGCGCTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTATTTTc                                                              <  2:868188/100‑1 (MQ=255)

                                      cGTTGGTGAGTACGGCGATTGCGCTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTATTTTCTg                                                            <  1:2831284/100‑1 (MQ=255)

                                        ttGGTGAGTACGGCGATTGCGCTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTATTTTCTggg                                                          >  2:6722503/1‑100 (MQ=255)

                                            tGAGTACGGCGATTGCGCTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACCCCTCGGGGTGCTGAGTATTTTCTGGGGGAt                                                      <  2:2043498/100‑1 (MQ=255)

                                            tGAGTACGGCGATTGCGCTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTATTTTCTGGGGGAt                                                      <  2:3850971/100‑1 (MQ=255)

                                            tGAGTACGGCGATTGCGCTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTATTTTCTGGGGGAt                                                      <  1:6273264/100‑1 (MQ=255)

                                            tGAGTACGGCGATTGCGCTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTATTTTCTGGGGGAt                                                      >  1:3605572/1‑100 (MQ=255)

                                             gAGTACGGCGATTGCGCTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTTAAATACACCTCGGGGTGCTGAGTATTTTCTGGGGGATc                                                     <  2:3335853/100‑1 (MQ=255)

                                             gAGTACGGCGATTGCGCTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTATTTTCTGGGGGATc                                                     <  1:463183/100‑1 (MQ=255)

                                               gTACGGCGATTGCGCTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTATTTTCTGGGGGATcgc                                                   <  2:2170882/100‑1 (MQ=255)

                                                  cGGCGATTGCGCTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTATTTTCTGGGGGATCGCgat                                                >  2:3896690/1‑100 (MQ=255)

                                                    gCGATTGCGCTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACTCCTCGGGGTGCTGAGTATTTTCTGGGGGATCGCgatga                                              <  1:907456/100‑1 (MQ=255)

                                                    gCGATTGCGCTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTATTTTCTGGGGGATCGCgatga                                              <  2:2434820/100‑1 (MQ=255)

                                                    gCGATTGCGCTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTATTTTCTGGGGGATCGCgatga                                              >  1:129236/1‑100 (MQ=255)

                                                       aTTGCGCTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGCGCTGAGTATTTTCTGGGGGATCGCgatgatga                                           >  2:5597727/1‑100 (MQ=255)

                                                         tGCGCTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTATTTTCTGGGGGATCGCGATGATGatc                                         <  2:1133623/100‑1 (MQ=255)

                                                         tGCGCTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTATTTTCTGGGGGATCGCGATGATGatc                                         <  1:150369/100‑1 (MQ=255)

                                                         tGCGCTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTATTTTCTGGGGGATCGCGATGATGatc                                         <  1:2430645/100‑1 (MQ=255)

                                                         tGCGCTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTATTTTCTGGGGGATCGCGATGATGatc                                         <  1:1094387/100‑1 (MQ=255)

                                                          gcgcTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTATTTTCTGGGGGATCGCGATGATGatca                                        >  1:4543939/1‑100 (MQ=255)

                                                           cgcTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTATTTTCTGGGGGATCGCGATGATGatcat                                       >  2:1489761/1‑100 (MQ=255)

                                                            gcTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTATTTTCTGGGGGATCGCGATGATGatcatc                                      <  1:6867285/100‑1 (MQ=255)

                                                               gTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTATTTTCTGGGGGATCGCGATGATGATCATCggg                                   <  2:5681518/100‑1 (MQ=255)

                                                                ttGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTATTTTCTGGGGGATCGCGATGATGATCATCGGGc                                  <  1:324248/100‑1 (MQ=255)

                                                                ttGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTATTTTCTGGGGGATCGCGATGATGATCATCGGGc                                  >  1:6684694/1‑100 (MQ=255)

                                                                     ggTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTATTTTCTGGGGGATCGCGATGATGATCATCGGGCTTGGt                             >  1:648341/1‑100 (MQ=255)

                                                                     ggTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTATTTTCTGGGGGATCGCGATGATGATCATCGGGCTTGGt                             <  2:3829704/100‑1 (MQ=255)

                                                                      gtgtGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTATTTTCTGGGGGATCGCGATGATGATCATCGGGCTTGGTa                            <  1:297409/100‑1 (MQ=255)

                                                                      gtgtGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTATTTTCTGGGGGATCGCGATGATGATCATCGGGCTTGGTa                            >  1:1600172/1‑100 (MQ=255)

                                                                      gtgtGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTATTTTCTGGGGGATCGCGATGATGATCATCGGGCTTGGTa                            >  1:5581364/1‑100 (MQ=255)

                                                                      gtgtGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTATTTTCTGGGGGATCGCGATGATGATCATCGGGCTTGGTa                            <  2:7148735/100‑1 (MQ=255)

                                                                       tgtgCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTATTTTCTGGGGGATCGCGATGATGATCATCGGGCTTGGTAt                           <  2:6769585/100‑1 (MQ=255)

                                                                       tgtgCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTATTTTCTGGGGGATCGCGATGATGATCATCGGGCTTGGTAt                           <  2:2613018/100‑1 (MQ=255)

                                                                       tgtgCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTATTTTCTGGGGGATCGCGATGATGATCATCGGGCTTGGTAt                           >  2:1534184/1‑100 (MQ=255)

                                                                        gtgCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTATTTTCTGGGGGATCGCGATGATGATCATCGGGCTTGGTATg                          >  2:5024588/1‑100 (MQ=255)

                                                                         tgCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTATTTTCTGGGGGATCGCGATGATGATCATCGGGCTTGGTATGc                         >  2:3229889/1‑100 (MQ=255)

                                                                         tgCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTATTTTCTGGGGGATCGCGATGATGATCATCGGGCTTGGTATGc                         >  1:1606121/1‑100 (MQ=255)

                                                                          gCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTATTTTCTGGGGGATCGCGATGATGATCATCGGGCTTGGTATGCa                        <  2:625157/100‑1 (MQ=255)

                                                                          gCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTATTTTCTGGGGGATCGCGATGATGATCATCGGGCTTGGTATGCa                        <  1:2360754/100‑1 (MQ=255)

                                                                          gCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTATTTTCTGGGGGATCGCGATGATGATCATCGGGCTTGGTATGCa                        <  1:5470915/100‑1 (MQ=255)

                                                                          gCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTATTTTCTGGGGGATCGCGATGATGATCATCGGGCTTGGTATGCa                        <  2:3007634/100‑1 (MQ=255)

                                                                           ccTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTATTTTCTGGGGGATCGCGATGATGATCATCGGGCTTGGTATGCAg                       <  2:4280263/100‑1 (MQ=255)

                                                                            cTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTATTTTCTGGGGGATCGCGATGATGATCATCGGGCTTGGTATGCAgg                      >  1:2705939/1‑100 (MQ=255)

                                                                             tGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTATTTTCTGGGGGATCGCGATGATGATCATCGGGCTTGGTATGCAGGt                     <  1:6052142/100‑1 (MQ=255)

                                                                              ggCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTATTTTCTGGGGGATCGCGATGATGATCATCGGGCTTGGTATGCAGGtt                    <  2:6566518/100‑1 (MQ=255)

                                                                               gCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTATTTTCTGGGGGATCGCGATGATGATCATCGGGCTTGGTATGCAGGTTa                   <  2:6902296/100‑1 (MQ=255)

                                                                               gCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTATTTTCTGGGGGATCGCGATGATGATCATCGGGCTTGGTATGCAGGTTa                   >  1:772762/1‑100 (MQ=255)

                                                                                cATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTATTTTCTGGGGGATCGCGATGATGATCATCGGGCTTGGTATGCAGGTTaa                  <  1:1046097/100‑1 (MQ=255)

                                                                                cATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTATTTTCTGGGGGATCGCGATGATGATCATCGGGCTTGGTATGCAGGTTaa                  >  2:356177/1‑100 (MQ=255)

                                                                                 aTTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTATTTTCTGGGGGATCGCGATGATGATCATCGGGCTTGGTATGCAGGTTaaa                 >  1:3309941/1‑100 (MQ=255)

                                                                                 aTTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTATTTTCTGGGGGATCGCGATGATGATCATCGGGCTTGGTATGCAGGTTaaa                 >  1:1013780/1‑100 (MQ=255)

                                                                                  ttGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTATTTTCTGGGGGATCGCGATGATGATCATCGGGCTTGGTATGCAGGTTAAAg                >  1:1229734/1‑100 (MQ=255)

                                                                                    gCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTATTTTCTGGGGGATCGCGATGATGATCATCGGGCTTGGTATGCAGGTTAAAGTg              <  2:6173761/100‑1 (MQ=255)

                                                                                     cTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTATTTTCTGGGGGATCGCGATGATGATCATCGGGCTTGGTATGCAGGTTAAAGTgc             >  2:4641050/1‑100 (MQ=255)

                                                                                      tGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTATTTTCTGGGGGATCGCGATGATGATCATCGGGCTTGGTATGCGGGTTAAAGTgct            >  2:4797667/1‑100 (MQ=255)

                                                                                        ttACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTATTTTCTGGGGGATCGCGATGATGATCATCGGGCTTGGTATGCAGGTTAAAGTgctgg          >  2:5906437/1‑100 (MQ=255)

                                                                                        ttACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTATTTTCTGGGGGATCGCGATGATGATCATCGGGCTTGGTATGCAGGTTAAAGTgctgg          >  2:6044887/1‑100 (MQ=255)

                                                                                        ttACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTATTTTCTGGGGGATCGCGATGATGATCATCGGGCTTGGTATGCAGGTTAAAGTgctgg          >  2:543105/1‑100 (MQ=255)

                                                                                        ttACCTGCGGCGAACAGTGAAATACACCTCGGGGGGCTGAGTATTTTCTGGGGGCTCGCGATGATGATCATCGGGCTTGGTATGCAGGTTAAAGTgctgg          >  2:785440/1‑100 (MQ=255)

                                                                                           ccTGCGGCGAACAGTGAAATACACCTCTGGGTGCTGAGTATTTTCTGGGGTATCGCGATGATGATCATCGGGCTTGGTATGCAGGTTAAAGTgctggcgc       <  1:6909391/100‑1 (MQ=255)

                                                                                           ccTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTATTTTCTGGGGGATCGCGATGATGATCATCGGGCTTGGTATGCAGGTTAAAGTgctggcgc       >  1:5547556/1‑100 (MQ=255)

                                                                                            cTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTATTTTCTGGGGGATCGCGATGATGATCATCGGGCTTGGTATGCAGGTTAAAGTgctggcgct      <  1:3879344/100‑1 (MQ=255)

                                                                                                ggcgAACAGTGAAATACACCTCGGGGTGCTGAGTATTTTCTGGGGGATCGCGATGATGATCATCGGGCTTGGTATGCAGGTTAAAGTGCTGGCGCTGGCa  >  2:4538986/1‑100 (MQ=255)

CGTGATTTTCGGTAAACTGGGTAATCAGTATGCGTCTGCGTTGGTGAGTACGGCGATTGCGCTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTATTTTCTGGGGGATCGCGATGATGATCATCGGGCTTGGTATGCAGGTTAAAGTGCTGGCGCTGGCA  >  NC_000913/1615837‑1616032

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.