BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,108,443	C→A	noncoding (56/76 nt)	pheV →	tRNA‑Phe

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,108,443	0	C	A	100.0%	1191.7 / NA	280	noncoding (56/76 nt)	pheV	tRNA‑Phe
Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (148/132); total (148/132)

Only 100 of 289 total aligned reads displayed.

TGATTGACGAGACGAGGCGAATCAGGTTTAATGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTCGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTGACAATAACCTTCACGAAAAAAATTAGC  >  NC_000913/3108346‑3108539

tgattgaCGAGACGAGGCGAATCAGGTTTAATGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGa                                                                                                >  1:4536722/1‑100 (MQ=255)

tgattgaCGAGACGAGGCGAATCAGGTTTAATGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGa                                                                                                <  2:3658142/100‑1 (MQ=255)

  attgaCGAGACGAGGCGAATCAGGTTTAATGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGAtt                                                                                              >  1:6037677/1‑100 (MQ=255)

  attgaCGAGACGAGGCGAATCAGGTTTAATGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGAtt                                                                                              <  2:1155238/100‑1 (MQ=255)

  attgaCGAGACGAGGCGAATCAGGTTTAATGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGAtt                                                                                              >  2:2261866/1‑100 (MQ=255)

   ttgaCGAGACGAGGCGAATCAGGTTTAATGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTc                                                                                             <  1:3927830/100‑1 (MQ=255)

   ttgaCGAGACGAGGCGAATCAGGTTTAATGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTc                                                                                             <  1:1916663/100‑1 (MQ=255)

       cgagacgagGCGAATCAGGTTTAATGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAg                                                                                         >  2:2269375/1‑100 (MQ=255)

         agacgagGCGAATCAGGTTTAATGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTc                                                                                       >  2:3144581/1‑100 (MQ=255)

         agacgagGCGAATCAGGTTTAATGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTc                                                                                       <  1:4593049/100‑1 (MQ=255)

         agacgagGCGAATCAGGTTTAATGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTc                                                                                       >  2:6623438/1‑100 (MQ=255)

         agacgagGCGAATCAGGTTTAATGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTc                                                                                       >  2:412538/1‑100 (MQ=255)

             gagGCGAATCAGGTTTAATGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCggg                                                                                   >  2:3831105/1‑100 (MQ=255)

                 cGAATCAGGTTTAATGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGcacc                                                                               >  2:2886358/1‑100 (MQ=255)

                   aaTCAGGTTTAATGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGcaccac                                                                             >  1:3660758/1‑100 (MQ=37)

                   aaTCAGGTTTAATGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGcaccac                                                                             >  1:3444227/1‑100 (MQ=37)

                    aTCAGGTTTAATGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACt                                                                            >  2:6891516/1‑100 (MQ=37)

                       aGGTTTAATGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAAt                                                                         <  2:4609059/100‑1 (MQ=255)

                       aGGTTTAATGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAAt                                                                         <  2:3582242/100‑1 (MQ=255)

                        ggTTTAATGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAAtt                                                                        >  1:1431263/1‑100 (MQ=37)

                         gTTTAATGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTc                                                                       <  2:2496371/100‑1 (MQ=255)

                         gTTTAATGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTc                                                                       >  2:508655/1‑100 (MQ=255)

                          tttAATGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCt                                                                      >  1:2413428/1‑100 (MQ=255)

                          tttAATGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCt                                                                      <  1:2258360/100‑1 (MQ=255)

                          gttAATGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCt                                                                      <  2:1797684/99‑1 (MQ=255)

                           ttAATGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCtt                                                                     >  2:1476302/1‑100 (MQ=255)

                            tAATGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGG‑TAGATTCCGAGTCCGGGCACCACTAATTCTTaa                                                                   <  1:1149316/100‑1 (MQ=255)

                              aTGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAg                                                                  >  1:4697627/1‑100 (MQ=255)

                              aTGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAg                                                                  >  1:4252364/1‑100 (MQ=255)

                               tGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGa                                                                 >  1:5749972/1‑100 (MQ=255)

                               tGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGa                                                                 >  2:2933536/1‑100 (MQ=255)

                               tGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGa                                                                 >  1:704908/1‑100 (MQ=255)

                                gcgcCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGaa                                                                <  1:5535349/100‑1 (MQ=255)

                                 cgcCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAAc                                                               <  1:5244293/100‑1 (MQ=255)

                                  gcCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAAcc                                                              <  1:1026449/100‑1 (MQ=255)

                                   ccccGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTTCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAAccc                                                             <  2:5215227/100‑1 (MQ=255)

                                   ccccGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAAccc                                                             >  2:448235/1‑100 (MQ=255)

                                    cccGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCg                                                            <  2:5227106/100‑1 (MQ=255)

                                    cccGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCg                                                            >  2:152106/1‑100 (MQ=255)

                                      cGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGcc                                                          >  2:7062645/1‑100 (MQ=255)

                                        ttGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCca                                                        <  2:2211701/100‑1 (MQ=255)

                                        ttGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCca                                                        <  1:5184863/100‑1 (MQ=255)

                                         tGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCcac                                                       <  2:336012/100‑1 (MQ=255)

                                          gCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCcaca                                                      <  1:5908136/100‑1 (MQ=255)

                                           cccGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACaa                                                     >  1:2170419/1‑100 (MQ=255)

                                           cccGGATAGCCCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACaa                                                     >  2:1885980/1‑100 (MQ=255)

                                            ccGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAg                                                    <  2:6683743/100‑1 (MQ=255)

                                                   gCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGtt                                             <  2:897278/100‑1 (MQ=255)

                                                     tCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGtttt                                           >  2:2730664/1‑100 (MQ=255)

                                                      cAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGttttt                                          >  2:3049947/1‑100 (MQ=255)

                                                       aGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTg                                         >  2:467857/1‑100 (MQ=255)

                                                       aGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTg                                         >  1:6415031/1‑100 (MQ=255)

                                                       aGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTg                                         >  1:4854050/1‑100 (MQ=255)

                                                       aGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGAACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTg                                         <  1:5964246/100‑1 (MQ=255)

                                                        gTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGc                                        <  2:6391286/100‑1 (MQ=255)

                                                         tCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCt                                       >  2:5760172/1‑100 (MQ=255)

                                                         tCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCt                                       >  1:6522087/1‑100 (MQ=255)

                                                         tCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCt                                       >  2:2621481/1‑100 (MQ=255)

                                                           ggTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCttt                                     <  1:5106613/100‑1 (MQ=255)

                                                             tAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTg                                   >  2:6202125/1‑100 (MQ=255)

                                                             tAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTg                                   >  2:367791/1‑100 (MQ=255)

                                                             tAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTg                                   >  2:4349746/1‑100 (MQ=255)

                                                              agagCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTgg                                  <  1:435911/100‑1 (MQ=255)

                                                              agagCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTgg                                  >  2:3454403/1‑100 (MQ=255)

                                                               gagCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGa                                 <  2:2337465/100‑1 (MQ=255)

                                                               gagCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGa                                 >  2:481619/1‑100 (MQ=255)

                                                               gagCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGa                                 >  2:1720843/1‑100 (MQ=255)

                                                               gagCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGCTTTTGCTTTTGGa                                 >  2:1293251/1‑100 (MQ=255)

                                                                agCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGAt                                >  2:4202854/1‑100 (MQ=255)

                                                                 gCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATc                               <  1:1663511/100‑1 (MQ=255)

                                                                   aGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTg                             <  1:6730674/100‑1 (MQ=255)

                                                                    ggggATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTGa                            >  2:6564798/1‑100 (MQ=255)

                                                                    ggggATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTGa                            >  2:5939915/1‑100 (MQ=255)

                                                                     gggATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTGAc                           <  2:3979345/100‑1 (MQ=255)

                                                                     gggATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTGAc                           <  2:537255/100‑1 (MQ=255)

                                                                      ggATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTGACa                          <  1:875289/100‑1 (MQ=255)

                                                                      ggATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTGACa                          <  2:6979855/100‑1 (MQ=255)

                                                                      ggATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTGACa                          >  1:3024440/1‑100 (MQ=255)

                                                                       gATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTGACaa                         <  2:6074265/100‑1 (MQ=255)

                                                                       gATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTGACaa                         <  1:2604741/100‑1 (MQ=255)

                                                                        aTTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTGACAAt                        <  1:4303719/100‑1 (MQ=255)

                                                                             aaaTCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTGACAATAACCt                   >  1:202487/1‑100 (MQ=255)

                                                                                 ccccGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTGACAATAACCTTCAc               <  2:2413428/100‑1 (MQ=255)

                                                                                 ccccGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTGACAATAACCTTCAc               <  1:3599324/100‑1 (MQ=255)

                                                                                   ccGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTGACAATAACCTTCACGa             <  1:1797116/100‑1 (MQ=255)

                                                                                   ccGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTGACAATAACCTTCACGa             <  1:1900204/100‑1 (MQ=255)

                                                                                      tgtCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTGACAATAACCTTCACGaaaa          <  2:937480/100‑1 (MQ=255)

                                                                                      tgtCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTGACAATAACCTTCACGaaaa          >  2:581300/1‑100 (MQ=255)

                                                                                      tgtCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTGACAATAACCTTCACGaaaa          >  1:6081707/1‑100 (MQ=255)

                                                                                      tgtCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTGACAATAACCTTCACGaaaa          >  2:1924326/1‑100 (MQ=255)

                                                                                      tgtCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTGACAATAACCTTCACGaaaa          >  1:3338642/1‑100 (MQ=255)

                                                                                        tCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTGACAATAACCTTCACGaaaaaa        >  2:1259236/1‑100 (MQ=255)

                                                                                        tCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTGACAATAACCTTCACGaaaaaa        <  1:6595106/100‑1 (MQ=255)

                                                                                          cTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTGACAATAACCTTCACGAAAAAAAt      >  2:6842913/1‑100 (MQ=255)

                                                                                          cTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTGACAATAACCTTCACGAAAAAAAt      <  1:1266678/100‑1 (MQ=255)

                                                                                          cTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTGACAATAACCTTCACGAAAAAAAt      <  1:295781/100‑1 (MQ=255)

                                                                                          cTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTGACAATAACCTTCACGAAAAAAAt      <  2:5445130/100‑1 (MQ=255)

                                                                                             ggTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTGACAATAACCTTCACGAAAAAAATTAg   >  1:5412891/1‑100 (MQ=255)

                                                                                              gTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTGACAATAACCTTCACGAAAAAAATTAGc  >  1:2150658/1‑100 (MQ=255)

                                                                                              gTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTGACAATAACCTTCACGAAAAAAATTAGc  >  2:738816/1‑100 (MQ=255)

TGATTGACGAGACGAGGCGAATCAGGTTTAATGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTCGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTGACAATAACCTTCACGAAAAAAATTAGC  >  NC_000913/3108346‑3108539

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`