New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1720640 =194 (0.710)3 (0.010) 3/152 38.1 1.7% coding (496/2013 nt) ydhK putative efflux protein (PET) component of YdhJK efflux pump
?NC_000913 = 1720636 173 (0.730)coding (492/2013 nt) ydhK putative efflux protein (PET) component of YdhJK efflux pump
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 197 total aligned reads displayed.

CCGATGGTTAATATTACTGAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAACATGCCAGTTTA  >  NC_000913/1720547‑1720732
                                                                                             |                                                                                            
gcGATGGTTAATATTACTGAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCatga                                                                                              <  1:7420919/93‑1 (MQ=255)
   aTGGTTAATATTACTGAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCatgatga                                                                                           >  1:6261244/1‑94 (MQ=255)
       ttAATATTACTGAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCatgatgatgat                                                                                       >  1:5968449/1‑94 (MQ=255)
         aaTATTACTGAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCAtgatgatgatga                                                                                     >  1:3631402/1‑94 (MQ=255)
          gtatTACTGAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATgatgatgatgat                                                                                    <  1:613541/93‑1 (MQ=255)
            tttACTGAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATcc                                                                                  <  1:4772735/93‑1 (MQ=255)
            atTACTGAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCatga                                                                                              >  2:2446475/1‑82 (MQ=255)
            atTACTGAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCatga                                                                                              >  2:6714458/1‑82 (MQ=255)
            atTACTGAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCatga                                                                                              <  2:1474118/82‑1 (MQ=255)
             ttACTGAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATccc                                                                                 >  1:7061899/1‑93 (MQ=255)
             atACTGAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCt                                                                                 <  1:6536602/93‑1 (MQ=255)
                gtGAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGTTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGcc                                                                              <  1:963245/93‑1 (MQ=255)
                cTGAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATACGCGGTATTTTGTGCGGCGGCatgatgat                                                                                          >  2:2796388/1‑82 (MQ=255)
                atGAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGcc                                                                              <  1:542087/93‑1 (MQ=255)
                 tGAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCatgatgatg                                                                                         >  2:1816321/1‑82 (MQ=255)
                   cggCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAg                                                                           <  1:637954/93‑1 (MQ=255)
                   aGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCatgatgatgat                                                                                       >  2:6229512/1‑82 (MQ=255)
                    agccagccaGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGc                                                                          <  1:3762981/93‑1 (MQ=255)
                      ccagccagCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATgatgatgatgat                                                                                    <  2:4173701/82‑1 (MQ=255)
                        cgccagcTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGtt                                                                      <  1:2810017/93‑1 (MQ=255)
                        agccagcTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATcc                                                                                  >  2:4453896/1‑82 (MQ=255)
                         gccagcTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCt                                                                                 >  2:543322/1‑82 (MQ=255)
                         gccagcTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGtta                                                                     >  1:4669025/1‑93 (MQ=255)
                         gccagcTGTGGGATATCGCTCAGGCGCACGTTTGCGAGGTAATAGTCGGTATTTAGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTc                                                                     <  1:3020151/94‑1 (MQ=255)
                           cagcTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGc                                                                               <  2:7370973/82‑1 (MQ=255)
                            agcTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGTTGATCCTGCCGAGCAGTTCCGa                                                                  <  1:7149663/94‑1 (MQ=255)
                            agcTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGcc                                                                              <  2:834169/82‑1 (MQ=255)
                             gcTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGac                                                                 >  1:5517386/1‑93 (MQ=255)
                             gcTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGaa                                                                 >  1:585355/1‑93 (MQ=255)
                              atgtgGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATg                                                                <  1:493595/93‑1 (MQ=255)
                               tgtgGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAg                                                                           >  2:5595263/1‑82 (MQ=255)
                               tgtgGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATgg                                                               >  1:5627102/1‑93 (MQ=255)
                               agtgGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGc                                                               <  1:3463772/93‑1 (MQ=255)
                                  gggATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAg                                                                        >  2:7342311/1‑82 (MQ=255)
                                   ggATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGt                                                                       >  2:1366730/1‑82 (MQ=255)
                                   ggATATCGCTCAGGCGCGCGCTTGCGAGGTAATAGTCGGTATTTTGTGCTGCGGCATGATGATGCTGATCCTGCCGCGCCGt                                                                       >  2:3427929/1‑82 (MQ=255)
                                    gATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTg                                                          <  1:6973208/94‑1 (MQ=255)
                                      tatCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGct                                                        >  1:5037029/1‑93 (MQ=255)
                                      aatCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGcc                                                        <  1:3418989/93‑1 (MQ=255)
                                       atCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCg                                                                   >  2:2184949/1‑82 (MQ=255)
                                       atCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCg                                                                   >  2:2622498/1‑82 (MQ=255)
                                       atCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGcca                                                       >  1:3837756/1‑93 (MQ=255)
                                         cGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCtt                                                     <  1:1416044/94‑1 (MQ=255)
                                          gCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATg                                                                <  2:6435483/82‑1 (MQ=255)
                                          gCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCtta                                                    >  1:5809548/1‑93 (MQ=255)
                                          gCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGC‑‑‑ATGATGATGATCCTGCCGAGCAGTTCCGATGCTa                                                             <  2:6290106/82‑1 (MQ=255)
                                             cAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTa                                                             <  2:6817254/82‑1 (MQ=255)
                                              aGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTAc                                                            <  2:6484383/82‑1 (MQ=255)
                                               ggCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAAca                                               >  1:2330010/1‑93 (MQ=255)
                                               ggCGCGCGGTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACt                                                           >  2:4915544/1‑82 (MQ=255)
                                                gcgcgcGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTACGATGCTACTg                                                          <  2:4113592/82‑1 (MQ=255)
                                                  gcgcgTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGcc                                            >  1:5318394/1‑93 (MQ=255)
                                                  gcgcgTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCa                                            <  1:1970331/94‑1 (MQ=255)
                                                   ggcgTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCAt                                           <  1:4567460/93‑1 (MQ=255)
                                                   cgcgTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCac                                           >  1:6701818/1‑93 (MQ=255)
                                                    gcgTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCt                                                      <  2:3579617/82‑1 (MQ=255)
                                                     cgTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCtt                                                     >  2:7033354/1‑82 (MQ=255)
                                                     cgTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCtt                                                     >  2:5237730/1‑82 (MQ=255)
                                                        ttGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTa                                                  >  2:4322061/1‑82 (MQ=255)
                                                        ttGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGaat                                      >  1:2179493/1‑93 (MQ=255)
                                                         tGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGCTGATGATCCTGCCGAGCCGTTCCGATGGTACTGCCCTTTTaa                                                 <  2:1042784/82‑1 (MQ=255)
                                                         tGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTaa                                                 >  2:7204800/1‑82 (MQ=255)
                                                         tGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTaa                                                 <  2:3926032/82‑1 (MQ=255)
                                                         cgCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGaaaa                                     <  1:356772/93‑1 (MQ=255)
                                                         agCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGaaaa                                     <  1:3219624/93‑1 (MQ=255)
                                                          gCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTTCGATGCTACTGCCCTTTTAACCGCATTGaaaaa                                    <  1:5884075/94‑1 (MQ=255)
                                                          gCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAAc                                                <  2:2337647/82‑1 (MQ=255)
                                                             tggTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACAt                                 <  1:209822/93‑1 (MQ=255)
                                                             gggaaaTAGTCGGTATTTTGTGCGGCGGCATGATGACGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGc                                             >  2:1551294/5‑82 (MQ=255)
                                                               gTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCAt                                           >  2:1711498/1‑82 (MQ=255)
                                                                gaaTAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCa                              <  1:5021036/93‑1 (MQ=255)
                                                                  aTAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCAca                            >  1:1132110/1‑93 (MQ=255)
                                                                   tAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGaa                                       <  2:5715146/82‑1 (MQ=255)
                                                                    ggTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGcc                          <  1:436426/93‑1 (MQ=255)
                                                                     gTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGccc                         >  1:6853670/1‑94 (MQ=255)
                                                                      tCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGaaaaa                                    >  2:3374526/1‑82 (MQ=255)
                                                                       cGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAAc                                   <  2:4261593/82‑1 (MQ=255)
                                                                       cGGTATTTTGTGCGGCGGC‑‑‑ATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATg                                >  2:2786175/1‑82 (MQ=255)
                                                                         gTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACAt                                 >  2:2402038/1‑82 (MQ=255)
                                                                           gttttGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTAc                   <  1:6601469/93‑1 (MQ=255)
                                                                            ttttGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCa                              <  2:5932722/82‑1 (MQ=255)
                                                                            ttttGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCa                              >  2:5002742/1‑82 (MQ=255)
                                                                            ttttGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCa                              >  2:1954818/1‑82 (MQ=255)
                                                                            ttttGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTAca                  >  1:3022398/1‑93 (MQ=255)
                                                                            ttttGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTAca                  >  1:2917419/1‑93 (MQ=255)
                                                                            ctttGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACt                  <  1:2367776/93‑1 (MQ=255)
                                                                              ttGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACg                            <  2:4772518/82‑1 (MQ=255)
                                                                                 tgCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGccc                         <  2:860005/82‑1 (MQ=255)
                                                                                 tgCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGccc                         >  2:4700878/1‑82 (MQ=255)
                                                                                 tgCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGccc                         <  2:6755904/82‑1 (MQ=255)
                                                                                  gcggcgGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCg                        >  2:3666822/1‑82 (MQ=255)
                                                                                     tcggcATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAACATGc         <  1:1556071/93‑1 (MQ=255)
                                                                                     gcggcATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAACATgg         >  1:7387506/1‑93 (MQ=255)
                                                                                       ggcATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAACATGccg       >  1:1840798/1‑93 (MQ=255)
                                                                                        ccATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAACATGCCAg      <  1:6790709/93‑1 (MQ=255)
                                                                                         aatgatgatgatgATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAACATGCCAGt     <  1:1064211/93‑1 (MQ=255)
                                                                                          atgatgatgatgATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACCGGAACATGCCAGtc    >  1:850406/1‑93 (MQ=255)
                                                                                           tgatgatgatgaTCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAACATGCCAGttg   >  1:4197104/1‑93 (MQ=255)
                                                                                            gatgatgatgatCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAACATGCCAGTTTa  >  1:7108897/1‑94 (MQ=255)
                                                                                             atgatgatgatCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAAc             <  2:2017039/82‑1 (MQ=255)
                                                                                             |                                                                                            
CCGATGGTTAATATTACTGAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAACATGCCAGTTTA  >  NC_000913/1720547‑1720732

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.