New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 123173 =334 (1.120)4 (0.010) 4/184 43.9 1.4% coding (157/2664 nt) aceE pyruvate dehydrogenase, decarboxylase component E1, thiamin‑binding
?NC_000913 266691 = 274 (1.000)coding (539/822 nt) yafZ CP4‑6 prophage; conserved protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 338 total aligned reads displayed.

GGCGATCGAATCGGTCATCCGTGAAGAAGGTGTTGAGCGTGCTCAGTATCTGATCGACCAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATCCCCGTTGAAGAACAACCGGAGTATCCGGGTAATCTGGAACTGGAACGCCGTATTCGTTCAGCTAT  >  NC_000913/123073‑123273
                                                                                                    |                                                                                                    
  cGATCGAATCGGTCATCCGTGAAGAAGGTGTTGAGCGTGCTCAGTATCTGATCGACCAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCa                                                                                                    >  2:3706172/1‑101 (MQ=255)
  cGATCGAATCGGTCATCCGTGAAGAAGGTGTTGAGCGTGCTCAGTATCTGATCGACCAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCa                                                                                                    <  2:80213/101‑1 (MQ=255)
   naTCGAATCGGTCATCCGTGAAGAAGGTGTTGAGCGTGCTCAGTATCTGATCGACCAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAg                                                                                                   <  2:4705745/100‑1 (MQ=255)
    aTCGAATCGGTCATCCGTGAAGAAGGTGTTGAGCGTGCTCAGTATCTGATCGACCAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAgg                                                                                                  <  2:4789170/101‑1 (MQ=255)
    aTCGAATCGGTCATCCGTGAAGAAGGTGTTGAGCGTGCTCAGTATCTGATCGACCAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAgg                                                                                                  >  1:2817918/1‑101 (MQ=255)
    aTCGAATCGGTCATCCGTGAAGAAGGGGTTGAGCGTGCTCAGTATCTGATCGACCAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAgg                                                                                                  >  1:6841584/1‑101 (MQ=255)
      cGAATCGGTCATCCGTGAAGAAGGTGTTGAGCGTGCTCAGTATCTGATCGACCAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGca                                                                                                >  1:2479502/1‑101 (MQ=255)
       gAATCGGTCATCCGTGAAGAAGGTGTTGAGCGTGCTCAGTATCTGATCGACCAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGcac                                                                                               <  1:5732661/101‑1 (MQ=255)
         aTCGGTCATCCGTGAAGAAGGTGTTGAGCGTGCTCAGTATCTGATCGACCAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAg                                                                                             >  2:5490331/1‑101 (MQ=255)
           cGGTCATCCGTGAAGAAGGTGTTGAGCGTGCTCAGTATCTGATCGACCAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGt                                                                                           >  2:2710477/1‑101 (MQ=255)
            ggTCATCCGTGAAGAAGGTGTTGAGCGTGCTCAGTATCTGATCGACCAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTa                                                                                          >  1:2199313/1‑101 (MQ=255)
            ggTCATCCGTGAAGAAGGTGTTGAGCGTGCTCAGTATCTGATCGACCAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTa                                                                                          <  2:5891493/101‑1 (MQ=255)
            ggTCATCCGTGAAGAAGGTGTTGAGCGTGCTCAGTATCTGATCGACCAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTa                                                                                          >  2:6457909/1‑101 (MQ=255)
             gTCATCCGTGAAGAAGGTGTTGAGCGTGCTCAGTATCTGATCGACCAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACTTAGCCGCAGGCACAGGTAt                                                                                         <  2:4498931/101‑1 (MQ=255)
             gTCATCCGTGAAGAAGGGGTTGAGCGTGCTCAGTATCTGATCGACCAACTGCTTGCTGAGGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTaa                                                                                         >  2:5791511/1‑100 (MQ=255)
                aTCCGTGAAGAAGGTGTTGAGCGTGCTCAGTATCTGATCGACCAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAg                                                                                      <  2:610778/101‑1 (MQ=255)
                aTCCGTGAAGAAGGTGTTGAGCGTGCTCAGTATCTGATCGACCAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAg                                                                                      >  1:4921098/1‑101 (MQ=255)
                aTCCGTGAAGAAGGTGTTGAGCGTGCTCAGTATCTGATCGACCAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAg                                                                                      >  2:6425292/1‑101 (MQ=255)
                 tCCGTGAAGAAGGTGTTGAGCGTGCTCAGTATCTGATCGACCAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGc                                                                                     <  1:502468/101‑1 (MQ=255)
                  ccGTGAAGAAGGGGTTGAGCGTGCTCAGTATCTGATCGACCAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGCAGCCGCAGGCACAGGAATCACCa                                                                                    >  2:5584548/1‑101 (MQ=255)
                    gTGAAGAAGGTGTTGAGCGTGCTCAGTATCTGATCGACCAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAAc                                                                                  <  2:4227524/101‑1 (MQ=255)
                    gTGAAGAAGGTGTTGAGCGTGCTCAGTATCTGATCGACCAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAAc                                                                                  >  2:5270553/1‑101 (MQ=255)
                     tGAAGAAGGTGTTGAGCGTGCTCAGTATCTGATCGACCAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACt                                                                                 <  2:3195454/101‑1 (MQ=255)
                     tGAAGAAGGTGTTGAGCGTGCTCAGTATCTGATCGACCAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACt                                                                                 <  2:3010803/101‑1 (MQ=255)
                          aagGTGTTGAGCGTGCTCAGTATCTGATCGACCAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATc                                                                            >  2:1281766/1‑101 (MQ=255)
                          aagGTGTTGAGCGTGCTCAGTATCTGATCGACCAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATc                                                                            <  1:1238913/101‑1 (MQ=255)
                          aagGTGTTGAGCGTGCTCAGTATCTGATCGACCAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATc                                                                            >  1:5386692/1‑101 (MQ=255)
                          aagGTGTTGAGCGTGCTCAGTATCTGATCGACCAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATc                                                                            >  1:2413807/1‑101 (MQ=255)
                           agGTGTTGAGCGTGCTCAGTATCTGATCGACCAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCa                                                                           >  2:1684903/1‑101 (MQ=255)
                               gtTGAGCGTGCTCAGTATCTGATCGACCAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAacac                                                                       <  1:1658083/101‑1 (MQ=255)
                               gtTGAGCGTGCTCAGTATCTGATCGACCAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAacac                                                                       >  1:1794423/1‑101 (MQ=255)
                               gtTGAGCGTGCTCAGTATCTGATCGACCAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAacac                                                                       <  2:1330220/101‑1 (MQ=255)
                                 tGAGCGTGCTCAGTATCTGATCGACCAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCa                                                                     >  1:4004002/1‑101 (MQ=255)
                                  gAGCGTGCTCAGTATCTGATCGACAAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCAt                                                                    <  2:2198623/101‑1 (MQ=255)
                                   aGCGTGCTCAGTATCTGATCGACCAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATc                                                                   >  2:2446453/1‑101 (MQ=255)
                                    gCGTGCTCAGTATCTGATCGACCAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATcc                                                                  <  1:5369959/101‑1 (MQ=255)
                                    gCGTGCTCAGTATCTGATCGACCAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATcc                                                                  <  2:491830/101‑1 (MQ=255)
                                      gTGCTCCGTATCTGATCGACCAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATcccc                                                                <  1:3684027/101‑1 (MQ=255)
                                      gTGCTCAGTATCTGATCGACCAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATcccc                                                                <  2:3878399/101‑1 (MQ=255)
                                      gTGCTCAGTATCTGATCGACCAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATcccc                                                                <  1:1402112/101‑1 (MQ=255)
                                      gTGCTCAGTATCTGATCGACCAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATcccc                                                                <  1:6124889/101‑1 (MQ=255)
                                       tGCTCAGTATCTGATCGACCAACTGCTTGCTGAAGCCCGCGAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATCCCCg                                                               <  1:3572833/101‑1 (MQ=255)
                                       tGCTCAGTATCTGATCGACCAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATCCCCg                                                               <  2:3832960/101‑1 (MQ=255)
                                       tGCTCAGTATCTGATCGACCAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATCCCCg                                                               <  1:6705115/101‑1 (MQ=255)
                                         cTCAGTCTCTGATCGACCAACTGCTTGCTGAAGCCCGCAAAGACGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATTCCCGtt                                                             <  2:4993184/101‑1 (MQ=255)
                                          tCAGTATCTGATCGACCAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATCCCCGtta                                                            >  2:1086648/1‑100 (MQ=255)
                                           aaGTATCTGATCGACCAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCCACTACATCAACACCATCCCCGTTga                                                           <  2:3445183/100‑1 (MQ=255)
                                            aGTATCTGATCGACCAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATCCCCGTTgaa                                                          <  1:1566434/101‑1 (MQ=255)
                                            aGTATCTGATCGACCAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATCCCCGTTgaa                                                          >  1:528026/1‑101 (MQ=255)
                                             gTATCTGATCGACCAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAACCGTAGCCGCAGGCAAAGGCATCAGCAACTACATCAACACCATCCCCGTTgaag                                                         <  2:6940802/101‑1 (MQ=255)
                                             gTATCTGATCGACCAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATCCCCGTTgaag                                                         <  2:1413711/101‑1 (MQ=255)
                                                tCTGATCGACCAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATCCCCGTTGAAGaac                                                      >  2:4961976/1‑101 (MQ=255)
                                                  tGATTGACCATCTGCTTGCCGAAGCACGCAAAGGCGGTGTAAACGTAGCAGCAGGCACAGGAATCAGCCACCACATCGACCCAATTCCCGTTGAAGaacag                                                    <  2:1827115/101‑2 (MQ=255)
                                                   gATCGACCAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATCCCCGTTGAAGaacaac                                                   >  2:1742977/1‑101 (MQ=255)
                                                    aTCGACCAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATCCCCGTTGAAGAACAAcc                                                  <  1:5885084/101‑1 (MQ=255)
                                                    aTCGACCAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATCCCCGTTGAAGAACAAcc                                                  <  2:544736/101‑1 (MQ=255)
                                                      cGACCAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATCCCCGTTGAAGAACAACCgg                                                >  1:954505/1‑101 (MQ=255)
                                                       gACCAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACCCCATCCCCGTTGAAGAACACCCGGa                                               <  2:2109678/101‑1 (MQ=255)
                                                       gACCAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATCCCCGTTGAAGAACAACCGGa                                               <  1:5490331/101‑1 (MQ=255)
                                                       gACCAACTGCTTGCTAAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATCCCCGTTGAAGAACAACCGGa                                               >  1:836030/1‑101 (MQ=255)
                                                         ccAACTGCTTGCTGAAGCCCGCAAAGGCTGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATCCCCGTTGAAGAACAACCGGAGt                                             <  1:7038034/101‑1 (MQ=255)
                                                         ccAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATCCCCGTTGNAGAACAACNNGANt                                             <  2:1117319/101‑1 (MQ=255)
                                                         ccAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATCCCCGTTGAAGAACAACCGGAGt                                             >  2:2376607/1‑101 (MQ=255)
                                                         ccAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATCCCCGTTGAAGAACAACCGGAGt                                             <  1:6439802/101‑1 (MQ=255)
                                                           aaCTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATCCCCGTTGAAGAACAACCGGAGTAt                                           >  2:1872101/1‑101 (MQ=255)
                                                             cTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATCCCCGTTGAAGAACAACCGGAGTATcc                                         <  2:2352179/101‑1 (MQ=255)
                                                             cTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATCCCCGTTGAAGAACAACCGGAGTATcc                                         <  2:5955665/101‑1 (MQ=255)
                                                              tgcttgctGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATCCCCGTTGAAGAACAACCGGAGTATCCg                                        <  1:2119856/101‑1 (MQ=255)
                                                              tgcttgctGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATCCCCGTTGAAGAACAACCGGAGTATCCg                                        >  2:4421649/1‑101 (MQ=255)
                                                              tgcttgctGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGGATCAGCAACTACATCAACACCATCCCCGTTGAAGAACAACCGGAGTATCCg                                        >  1:2716237/1‑101 (MQ=255)
                                                               gcttgctGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATCCCCGTTGAAGAACAACCGGAGTATCCgg                                       <  1:5136939/101‑1 (MQ=255)
                                                                 ttgctGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCCTCCCCGTTGAAGAACAACCGGAGTATCCGGGt                                     >  2:637764/1‑101 (MQ=255)
                                                                  tgctGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATCCCCGTTGAAGAACAACCGGAGTATCCGGGTa                                    >  2:3955676/1‑101 (MQ=255)
                                                                  agctGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATCCCCGTTGAAGAACAACCGGAGGATCCGGGTa                                    >  2:4206077/2‑101 (MQ=255)
                                                                    ctGAAGCCCGCAAAGGCGGTGTAAACGCAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATCCCCGTTGAAGAACAACCGGAGTATCCGGGTAAt                                  <  1:2353959/101‑1 (MQ=255)
                                                                     tGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATCCCCGTTGAAGAACAACCGGAGTATCCGGGTAATc                                 >  1:3271154/1‑101 (MQ=255)
                                                                       aaGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATCCCCGTTGAAGAACAACCGGAGTATCCGGGTAATctg                               >  2:364010/1‑101 (MQ=255)
                                                                         gCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATCCCCGTTGAAGAACAACCGGAGTATCCGGGTAATctgga                             <  2:1780504/101‑1 (MQ=255)
                                                                           ccGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATCCCCGTTGAAGAAAAACCGGAGTATCCGGGAAATctggaac                           >  1:3030379/1‑101 (MQ=255)
                                                                             gCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATCCCCGTTGAAGAACAACCGGAGTATCCGGGTAATctggaactg                         <  1:4281495/101‑1 (MQ=255)
                                                                             gCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATCCCCGTTGAAGAACAACCGGAGTATCCGGGTAATctggaactg                         <  2:1941851/101‑1 (MQ=255)
                                                                              cAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATCCCCGTTGAAGAACAACCGGAGTATCCGGGTAATctggaactgg                        >  1:6468036/1‑101 (MQ=255)
                                                                               aaaGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATCCCCGTTGAAGAACAACCGGAGTATCCGGGTAATctggaactgga                       >  1:3884291/1‑101 (MQ=255)
                                                                               aaaGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATCCCCGTTGAAGAACAACCGGAGTATCCGGGTAATctggaactgga                       >  1:730122/1‑101 (MQ=255)
                                                                               aaaGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATCCCCGTTGAAGAACAACCGGAGTATCCGGGTAATctggaactgga                       >  1:4765672/1‑101 (MQ=255)
                                                                                aaGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATCCCCGTTGAAGAACAACCGGAGTATCCGGGTAATctggaactggaa                      >  1:6977184/1‑101 (MQ=255)
                                                                                 aGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATCCCCGTTGAAGAACAACCGGAGTATCCGGGTAATCtggaactggaac                     <  1:1998347/101‑1 (MQ=255)
                                                                                  ggCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATCCCCGTTGAAGAACAACCGGAGTATCCGGGTAATCTGGAACTGGAACg                    >  2:5727054/1‑101 (MQ=255)
                                                                                   gCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATCCCCGTTGAAGAACAACCGGAGTATCCGGGTAATCTGGAACTGGAACGc                   >  1:4450443/1‑101 (MQ=255)
                                                                                         tAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATCCCCGTTGAAGAACAACCGGAGTATCCGGGTAATCTGGAACTGGAACGCCGTAtt             >  1:3121329/1‑101 (MQ=255)
                                                                                         tAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATCCCCGTTGAAGAACAACCGGAGTATCCGGGTAATCTGGAACTGGAACGCCGTAtt             <  2:6607167/101‑1 (MQ=255)
                                                                                         tAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATCCCCGTTGAAGAACAACCGGAGTATCCGGGTAATCTGGAACTGGAACGCCGTAtt             <  1:3763220/101‑1 (MQ=255)
                                                                                          aaaCGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATCCCCGTTGAAGAACAACCGGAGTATCCGGGTAATCTGGAACTGGAACGCCGTATTc            <  1:1915825/101‑1 (MQ=255)
                                                                                           aaCGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATCCCCGTTGAAGAACAACCGGAGTATCCGGGTAATCTGGAACTGGAACGCCGTATTCg           >  1:6061967/1‑101 (MQ=255)
                                                                                            aCGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATCCCCGTTGAAGAACAACCGGAGTATCCGGGTAATCTGGAACTGGAACGCCGTATTCGt          <  2:2588887/101‑1 (MQ=255)
                                                                                             cGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATCCCCGTTGAAGAACAACCGGAGTACCCGGGTAATCTGGAACTGGAACGCCGTATTCGtt         <  2:3143498/101‑1 (MQ=255)
                                                                                               tAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATCCCCGTTGAAGAACAACCGGAGTATCCGGGTAATCTGGAACTGGAACGCCGTATTCGTTCa       <  1:4845361/101‑1 (MQ=255)
                                                                                                aGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATCCCCGTTGAAGAACAACCGGAGTATCCGGGTAATCTGGAACTGGAACGCCGTATTCGTTCAg      >  2:2230746/1‑101 (MQ=255)
                                                                                                aGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATCCCCGTTGAAGAACAACCGGAGTATCCGGGTAATCTGGAACTGGAACGCCGTATTCGTTCAg      >  2:1476208/1‑101 (MQ=255)
                                                                                                aGCCGCAGGCACAGGGATCAGCAACTACATCAACACCATCCCCGTTGAAGAACAACCGGAGTATCCGGGTAATCTGGAACTGGAACGCCGTATTCGTTCAg      >  2:6786175/1‑101 (MQ=255)
                                                                                                    |                                                                                                    
GGCGATCGAATCGGTCATCCGTGAAGAAGGTGTTGAGCGTGCTCAGTATCTGATCGACCAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATCCCCGTTGAAGAACAACCGGAGTATCCGGGTAATCTGGAACTGGAACGCCGTATTCGTTCAGCTAT  >  NC_000913/123073‑123273

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.