New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 1041238NA (NA)4 (0.010) 4/180 43.3 1.4% noncoding (31/34 nt) REP90 (repetitive extragenic palindromic) element; contains 1 REP sequences REP90 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 2863608 = 288 (1.080)coding (486/1365 nt) ygbN putative transporter
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 306 total aligned reads displayed.

ATGCATAAAAAAGAGCATTCAGTTACCTGAATGCTCTGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGA  >  NC_000913/1041138‑1041338
                                                                                                    |                                                                                                    
aTGCATAAAAAAGAGCATTCAGTTACCTGAATGCTCTGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATcc                                                                                                      <  1:4155284/101‑1 (MQ=255)
aTGCATAAAAAAGAGCATTCAGTTACCTGAATGCTCTGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATcc                                                                                                      <  2:4566752/101‑1 (MQ=255)
aTGCATAAAAAAGAGCATTCAGTCACCTGAATGCTCTGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATcc                                                                                                      <  2:6645004/101‑1 (MQ=255)
 tgtaTAAAAAAGAGCATTCAGTTACCTGAATGCTCTGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATcca                                                                                                     <  2:1796075/98‑2 (MQ=255)
  gCATAAAAAAGAGCATTCAGTTACCTGAATGCTCTGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCgg                                                                                                    <  1:2008623/101‑1 (MQ=255)
   cATAAAAAAGAGCATTCAGTTACCTGAATGCTCTGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGc                                                                                                   >  1:5293321/1‑101 (MQ=255)
     tAAAAAAGAGCATTCAGTTACCTGAATGCTCTGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGccc                                                                                                 >  1:5102804/1‑100 (MQ=255)
      aaaaaaGAGCATTCAGTTACCTGAATGCTCTGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCAc                                                                                                >  2:3667754/1‑101 (MQ=255)
      aaaaaaGAGCATTCAGTTACCTGAATGCTCTGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCAc                                                                                                <  1:3387706/101‑1 (MQ=255)
       aaaaaGAGCATTCAGTTACCTGAATGCTCTGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACt                                                                                               <  1:1266117/101‑1 (MQ=255)
       aaaaaGAGCATTCAGTTACCTGAATGCTCTGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACt                                                                                               <  1:4302293/101‑1 (MQ=255)
        aaaaGAGCATTCAGTTACCTGAATGCTCTGAGGCTGTTGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACtt                                                                                              >  2:1494058/1‑101 (MQ=255)
        aaaaGAGCATTCAGTTACCTGAATGCTCTGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCCCtt                                                                                              >  2:2267983/1‑101 (MQ=255)
          aaGAGCATTCAGTTACCTTAATGCTCTGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTc                                                                                            >  2:3193634/1‑101 (MQ=255)
          aaGAGCATTCAGTTACCTGAATGCTCTGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTc                                                                                            >  2:5138239/1‑101 (MQ=255)
             agCATTCAGTTACCTGAATGCTCTGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGt                                                                                         >  1:6688503/1‑101 (MQ=255)
              gCATTCAGTTACCTGAATGCTCTGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGtt                                                                                        <  1:2736165/101‑1 (MQ=255)
                aTTCAGTTACCTGAATGCTCTGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGtttt                                                                                      >  2:5205284/1‑101 (MQ=255)
                aTTCAGTTACCTGAATGCTCTGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGtttt                                                                                      <  1:2241899/101‑1 (MQ=255)
                 ttCAGTTACCTGAATGCTCTGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCTGTTTTa                                                                                     >  2:4653555/1‑101 (MQ=255)
                 ttCAGTTACCTGAATGCTCTGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTa                                                                                     <  1:5807198/101‑1 (MQ=255)
                  tCAGTTACCTGAATGCTCTGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTAc                                                                                    <  1:885761/101‑1 (MQ=255)
                   cAGTTACCTGAATGCTCTGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTAct                                                                                   >  2:1192659/1‑101 (MQ=255)
                     gTTACCTGAATGCTCTGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTActct                                                                                 >  2:534747/1‑101 (MQ=255)
                      ttACCTGAATGCTCTGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTAAGTTTTACTCtt                                                                                >  1:3078339/1‑101 (MQ=255)
                       tACCTGAATGCTCTGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCttt                                                                               <  2:6134196/101‑1 (MQ=255)
                       tACCTGAATGCTCTGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCttt                                                                               >  1:5687108/1‑101 (MQ=255)
                         ccTGAATGCTCTGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTtct                                                                             <  1:1182137/101‑1 (MQ=255)
                         ccTGAATGCTCTGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTtct                                                                             <  1:2640074/101‑1 (MQ=255)
                         ccTGAATGCTCTGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTtct                                                                             <  1:250087/101‑1 (MQ=255)
                            gAATGCTCTGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCgg                                                                          >  1:3910321/1‑101 (MQ=255)
                                gCTCTGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTa                                                                      <  2:1819564/101‑1 (MQ=255)
                                gCTCTGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTa                                                                      >  1:6984067/1‑101 (MQ=255)
                                  tctGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAAc                                                                    >  2:4213221/1‑101 (MQ=255)
                                   ctGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACt                                                                   <  2:4980852/101‑1 (MQ=255)
                                   ctGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACt                                                                   <  1:594182/101‑1 (MQ=255)
                                    tGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACta                                                                  >  2:5631653/1‑101 (MQ=255)
                                    tGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACta                                                                  <  2:883448/101‑1 (MQ=255)
                                      aGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACtata                                                                <  1:4769202/101‑1 (MQ=255)
                                      aGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACtata                                                                >  2:4395368/1‑101 (MQ=255)
                                       ggCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATaa                                                               >  1:502141/1‑101 (MQ=255)
                                         cTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAAcc                                                             <  1:1336754/101‑1 (MQ=255)
                                         cTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAAcc                                                             <  1:1765870/101‑1 (MQ=255)
                                          tgatgaCAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCg                                                            <  2:2983298/101‑1 (MQ=255)
                                          tgatgaCAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCg                                                            >  1:6254798/1‑101 (MQ=255)
                                          tgatgaCAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCg                                                            >  2:6676090/1‑101 (MQ=255)
                                             tgaCAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTaa                                                         >  2:650928/1‑101 (MQ=255)
                                                cAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAg                                                      <  2:4117506/101‑1 (MQ=255)
                                                 aaaCGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGt                                                     <  2:3847147/101‑1 (MQ=255)
                                                 aaaCGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGt                                                     >  1:5523304/1‑101 (MQ=255)
                                                  aaCGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGtt                                                    <  1:4582434/101‑1 (MQ=255)
                                                    cGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTtat                                                  <  1:1478523/101‑1 (MQ=255)
                                                    cGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTtat                                                  <  1:341559/101‑1 (MQ=255)
                                                     gaagaaCTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTtata                                                 >  2:597979/1‑101 (MQ=255)
                                                     gaagaaCTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTtata                                                 <  1:1956353/101‑1 (MQ=255)
                                                     gaagaaCTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTtata                                                 >  1:3196039/1‑101 (MQ=255)
                                                      aagaaCTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAg                                                >  1:1042407/1‑101 (MQ=255)
                                                       agaaCTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGc                                               <  1:4074159/101‑1 (MQ=255)
                                                         aaCTGTCTAATGCGTAGACCGGAAAAGGCGTTCGCGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGcct                                             >  2:3251692/1‑100 (MQ=255)
                                                          aCTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGt                                            <  1:3695635/101‑1 (MQ=255)
                                                             gTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAAc                                         <  2:5699127/101‑1 (MQ=255)
                                                             gTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAAc                                         >  1:3343289/1‑101 (MQ=255)
                                                               cTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTg                                       >  2:2170188/1‑101 (MQ=255)
                                                                tAAGGCGTGGACCGGAAAAGGTGTTCACGCCGCATCCGGCTTCTTTCAGTGTTACTCTTTCTCCGGGTAACTATAAGCGTACTGGTTATAGCCGGAAccgg                                      >  2:73718/1‑98 (MQ=19)
                                                                 aaTGCGTAGACCGCAAAAGGCGTTCCCCCTGCATCCGGAAATTTTACGTTTTACTCTATCCGGGAGTAACTATAACCGTAACCGTTATAGACGTGCCTGTa                                     <  2:6862164/101‑1 (MQ=255)
                                                                  aTGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTaa                                    >  1:6375968/1‑101 (MQ=255)
                                                                  aTGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTaa                                    <  2:5818076/101‑1 (MQ=255)
                                                                    gCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGc                                  <  2:1684249/101‑1 (MQ=255)
                                                                    gCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGc                                  <  1:4875085/101‑1 (MQ=255)
                                                                     cGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCg                                 <  2:3355965/101‑1 (MQ=255)
                                                                     cGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCg                                 >  2:6348964/1‑101 (MQ=255)
                                                                      gTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCgg                                <  1:562179/101‑1 (MQ=255)
                                                                      gTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCgg                                >  2:1280937/1‑101 (MQ=255)
                                                                      gTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCgg                                >  1:4372300/1‑101 (MQ=255)
                                                                       tAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCggg                               >  2:5335299/1‑100 (MQ=255)
                                                                          aCCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCt                            <  2:2583066/101‑1 (MQ=255)
                                                                           ccGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTCATAGTTATAGCCGTAACTGTAAGCGGTGCTg                           <  2:3154418/101‑1 (MQ=255)
                                                                            cGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTgg                          >  1:7047974/1‑101 (MQ=255)
                                                                             ggAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGgc                         >  1:514704/1‑101 (MQ=255)
                                                                                 aaGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGt                     >  1:3772007/1‑101 (MQ=255)
                                                                                  aGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGtt                    >  2:4142001/1‑101 (MQ=255)
                                                                                  aGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGtt                    <  2:4814613/101‑1 (MQ=255)
                                                                                   ggCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGgc                         <  2:6280114/95‑1 (MQ=255)
                                                                                    gCGTTCACGCCGGCTCCGGCCACTTTCAGTTTTACTCTTCCTCGGAGTAACTATAACCGTAATAGTTATAGCTGTAACTGTAAGCGGTGCTGGCGCGTTTa                  <  1:4632072/101‑1 (MQ=255)
                                                                                    gCGTTCACGCCGCATCCGGCCACTTTCCGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGGGCTGGCGCGTTTa                  >  1:6547804/1‑101 (MQ=255)
                                                                                    gCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTa                  <  1:996024/101‑1 (MQ=255)
                                                                                    gCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTa                  <  1:5394034/101‑1 (MQ=255)
                                                                                      gTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAAt                >  1:3872343/1‑101 (MQ=255)
                                                                                         taCGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATcac             <  2:3456512/100‑1 (MQ=255)
                                                                                          aCGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATcaca            >  2:2859986/1‑101 (MQ=255)
                                                                                           agccgcATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGGAACTGTAAGCGGTGCTGGCGCGTTTAATCacac           <  2:1065270/100‑1 (MQ=255)
                                                                                            gccgcATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACAcc          <  2:6984067/101‑1 (MQ=255)
                                                                                            gccgcATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACAcc          <  2:1573328/101‑1 (MQ=255)
                                                                                             ccgcATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCa         <  1:2366585/101‑1 (MQ=255)
                                                                                              cgcATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCAt        >  1:2981026/1‑101 (MQ=255)
                                                                                                cATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTg      <  1:6113142/101‑1 (MQ=255)
                                                                                                 aTCCGCCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGa     >  2:2023850/1‑101 (MQ=255)
                                                                                                   ncGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAgg   >  1:4982079/2‑101 (MQ=255)
                                                                                                   ccGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAgg   <  1:2859986/101‑1 (MQ=255)
                                                                                                    cGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGa  <  1:6587992/101‑1 (MQ=255)
                                                                                                    |                                                                                                    
ATGCATAAAAAAGAGCATTCAGTTACCTGAATGCTCTGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGA  >  NC_000913/1041138‑1041338

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.