New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2206843260 (0.870)3 (0.010) 3/176 44.0 1.2% coding (855/1137 nt) yehP hypothetical protein
?NC_000913 = 2731231 268 (1.030)coding (965/2574 nt) clpB protein disaggregation chaperone
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 305 total aligned reads displayed.

TTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCGCCGGTTTCAGCATGTTTCCGGCGTCCATTGCGCCATCGGC  >  NC_000913/2731131‑2731331
                                                                                                    |                                                                                                    
 tCTTTCAGGCCCCGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTa                                                                                                     <  2:4461011/101‑1 (MQ=255)
  cTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTAc                                                                                                    <  1:5089096/101‑1 (MQ=255)
  cTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTAc                                                                                                    <  2:2300810/101‑1 (MQ=255)
   tttCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACt                                                                                                   <  2:4225092/101‑1 (MQ=255)
   tttCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACt                                                                                                   >  2:4650669/1‑101 (MQ=255)
    ttCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTg                                                                                                  >  1:4403443/1‑101 (MQ=255)
    gtCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTCTCTGGAAACGACGTTCCAGCGCAGCCTCTTTTTCAATGTACtn                                                                                                  <  1:3217150/100‑2 (MQ=255)
          ccACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGata                                                                                            >  2:1600740/1‑101 (MQ=255)
          ccACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGata                                                                                            <  2:369780/101‑1 (MQ=255)
            aCGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATAtt                                                                                          >  1:6895184/1‑101 (MQ=255)
             cGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTCGACACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTc                                                                                         >  1:2862041/1‑101 (MQ=255)
              gCAGAATCGCAATGGTATCTTCAACAGAAGGCTCAGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCg                                                                                        <  1:6377179/101‑1 (MQ=255)
                 gAATCGCAATTGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTCCTGGCGATATTCGTCa                                                                                     <  2:4310774/101‑1 (MQ=255)
                 gAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCa                                                                                     >  2:1909534/1‑101 (MQ=255)
                  aaTCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACCCTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCaa                                                                                    <  1:1029954/101‑1 (MQ=255)
                     cGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGcg                                                                                 >  1:2824756/1‑101 (MQ=255)
                     cGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGcg                                                                                 >  1:1878697/1‑101 (MQ=255)
                      gCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGcgt                                                                                <  1:2203189/101‑1 (MQ=255)
                       cAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGcgtc                                                                               <  1:6182627/101‑1 (MQ=255)
                       cAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGcgtc                                                                               >  2:3146484/1‑101 (MQ=255)
                         aTGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGcgtcgt                                                                             >  2:178221/1‑101 (MQ=255)
                          tGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTg                                                                            <  2:1362756/101‑1 (MQ=255)
                           ggTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTgg                                                                           >  1:2766217/1‑101 (MQ=255)
                             tATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCa                                                                         >  1:847011/1‑101 (MQ=255)
                              atattCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCAc                                                                        >  2:4030884/4‑101 (MQ=255)
                                cTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCt                                                                      >  1:2319016/1‑101 (MQ=255)
                                 ttCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTa                                                                     >  1:2673819/1‑101 (MQ=255)
                                 ttCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTa                                                                     <  2:1847755/101‑1 (MQ=255)
                                  tCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTAc                                                                    <  1:1313564/101‑1 (MQ=255)
                                  tCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTAc                                                                    <  2:1454445/101‑1 (MQ=255)
                                  tCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTAc                                                                    >  2:6661929/1‑101 (MQ=255)
                                   cAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACg                                                                   >  2:1015607/1‑101 (MQ=255)
                                    aaCAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGc                                                                  >  2:3364432/1‑101 (MQ=255)
                                     aCAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCCTGGCACCTACGCa                                                                 >  2:4566717/1‑101 (MQ=255)
                                      cAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAg                                                                >  2:3736309/1‑101 (MQ=255)
                                       aGAAGGCTCGGCAACAAACTCTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGt                                                               <  2:5558944/101‑1 (MQ=255)
                                       aGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGt                                                               >  2:2818313/1‑101 (MQ=255)
                                         aaGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGc                                                             >  1:5368723/1‑101 (MQ=255)
                                         aaGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGc                                                             >  2:5777052/1‑101 (MQ=255)
                                         aaGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGc                                                             >  2:4967879/1‑101 (MQ=255)
                                            gCTCGGCAACAAGCACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAAt                                                          <  2:1162319/101‑1 (MQ=255)
                                            gCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAAt                                                          >  2:6468576/1‑101 (MQ=255)
                                            gCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAAt                                                          >  1:560419/1‑101 (MQ=255)
                                               cGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTcc                                                       >  1:1194355/1‑100 (MQ=255)
                                                ggCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTcac                                                      >  2:3019219/1‑101 (MQ=255)
                                                ggCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTcac                                                      >  2:6310038/1‑101 (MQ=255)
                                                ggCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTcac                                                      >  1:6264759/1‑101 (MQ=255)
                                                ggCAAAAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTTGCCATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTcac                                                      <  2:65680/101‑1 (MQ=255)
                                                 gCAAGAAACACTTTCTGGAAACGACGGTCCAGCGCAGCATCGTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTcacc                                                     >  2:6884936/1‑101 (MQ=255)
                                                  caacaaACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTcacca                                                    <  2:6781657/101‑1 (MQ=255)
                                                   aacaaacaCTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTcaccac                                                   >  2:502075/1‑101 (MQ=255)
                                                   aacaaacaCTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTcaccac                                                   <  1:5777052/101‑1 (MQ=255)
                                                   aacaaacaCTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTcaccac                                                   <  1:5333080/101‑1 (MQ=255)
                                                     caaacaCTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCAcgc                                                 >  2:1235358/1‑101 (MQ=255)
                                                       aacaCTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACgcgc                                               >  1:2813772/1‑101 (MQ=255)
                                                         cacTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGAGCAATTCACCACGCGCCa                                             >  2:2552806/1‑101 (MQ=255)
                                                           cTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAgc                                           <  2:5365929/101‑1 (MQ=255)
                                                           cTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAgc                                           >  2:3448665/1‑101 (MQ=255)
                                                           cTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAgc                                           >  1:6591995/1‑101 (MQ=255)
                                                              tCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCGcc                                        <  1:3146484/101‑1 (MQ=255)
                                                              tCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACATACGCAGTGCAATTCACCACGCGCCAGCGcc                                        <  1:5034868/101‑1 (MQ=255)
                                                                tGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGAGCCgg                                      >  1:69522/1‑101 (MQ=255)
                                                                 ggAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCGCCGGt                                     <  1:5519674/101‑1 (MQ=255)
                                                                 ggAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCGCCGGt                                     >  1:966741/1‑101 (MQ=255)
                                                                  gAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCGCCGGtt                                    >  1:222043/1‑101 (MQ=255)
                                                                     acgacgTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCGCCGGTTTCa                                 >  2:4410092/1‑101 (MQ=255)
                                                                     acgacgTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCGCCGGGTTCa                                 >  1:3629351/1‑101 (MQ=255)
                                                                       gacgTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCCCCACGCGCCAGCGCCGGTTTCAGc                               <  1:1593166/101‑1 (MQ=255)
                                                                       gacgTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCGCCGGTTTCAGc                               >  1:2007736/1‑101 (MQ=255)
                                                                       gacgTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCGCCGGTTTCAGc                               >  1:778694/1‑101 (MQ=255)
                                                                       gacgTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCGCCGGTTTCAGc                               <  1:6304283/101‑1 (MQ=255)
                                                                        acgTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCGCCGGTTTCAGCa                              >  1:6515134/1‑101 (MQ=255)
                                                                          gTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCGCCGGTTTCAGCATg                            >  1:4132825/1‑101 (MQ=255)
                                                                           ttCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCGCCGGTTTCAGCATgn                           >  2:3906261/1‑100 (MQ=255)
                                                                            tCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCGCCGGTTTCAGCATGtt                          >  1:2486649/1‑101 (MQ=255)
                                                                              cAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCGCCGGTTTCAGCATGTTTc                        <  2:4785712/101‑1 (MQ=255)
                                                                                gcgcAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCCCCTACGCAGTGCAATTCACCACGCGCCAGCGCCGGTTTCAGCATGTTTCCg                      <  1:4490030/101‑1 (MQ=255)
                                                                                 cgcAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCGCCGGTTTCAGCATGTTTCCgg                     >  2:4831295/1‑101 (MQ=255)
                                                                                 cgcAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCGCCGGTTTCAGCATGTTTCCgg                     >  1:1770222/1‑101 (MQ=255)
                                                                                 cgcAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCGCCGGTTTCAGCATGTTTCCgg                     >  1:6079622/1‑101 (MQ=255)
                                                                                  gcagcaTCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCGCCGGTTTCAGCATGTTTCCGGc                    >  1:2418385/1‑101 (MQ=255)
                                                                                   cagcaTCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCGCCGGTTTCAGCATGTTTCCGGCg                   <  2:5981498/101‑1 (MQ=255)
                                                                                    agcaTCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCGCCGGTTTCAGCATGTTTCCGGCGt                  <  1:4309415/101‑1 (MQ=255)
                                                                                      caTCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCGCCGGTTTCAGCATGTTTCCGGCGTcc                >  1:6827754/1‑101 (MQ=255)
                                                                                      caTCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCGCCGGTTTCAGCATGTTTCCGGCGTcc                <  1:2632702/101‑1 (MQ=255)
                                                                                       aTCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCGCCGGTTTCAGCATGTTTCCGGCGTCCa               <  1:5182228/101‑1 (MQ=255)
                                                                                        acTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCGCCGGTTTCAGCATGTTTCCGGCGTCCAt              <  2:2197779/100‑1 (MQ=255)
                                                                                         cTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCGCCGGTTTCAGCATGTTTCCGGCGTCCAtt             <  1:3957067/101‑1 (MQ=255)
                                                                                          tttttCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCGCCGGTTTCAGCATGTTTCCGGCGTCCATTg            <  2:5627661/101‑1 (MQ=255)
                                                                                           ttttCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCGCCGGTTTCAGCATGTTTCCGGCGTCCATTgc           <  2:5167176/101‑1 (MQ=255)
                                                                                           ttttCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCGCCGGTTTCAGCATGTTTCCGGCGTCCATTgc           >  2:2078678/1‑101 (MQ=255)
                                                                                            tttCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCGCCGGTTTCAGCATGTTTCCGGCGTCCATTgcg          >  2:5278560/1‑101 (MQ=255)
                                                                                            tttCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCGCCGGTTTCAGCATGTTTCCGGCGTCCATTgcg          <  2:6264191/101‑1 (MQ=255)
                                                                                              tCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCATGCGCCAGCGCCGGTTTCAGCATGTTTCCGGCGTCCATTGCGcc        >  1:5870398/1‑101 (MQ=255)
                                                                                               cAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCGCCGGTTTCAGCATGTTTCCGGCGTCCATTGCGCCa       >  1:4913464/1‑101 (MQ=255)
                                                                                               cAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCGCCGGTTTCAGCATGTTTCCGGCGTCCATTGCGCCa       <  2:778694/101‑1 (MQ=255)
                                                                                                aaTGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCGCCGGTTTCAGCATGTTTCCGGCGTCCATTGCGCCAt      <  2:2650165/101‑1 (MQ=255)
                                                                                                   gTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCGCCGGTTTCAGCATGTTTCCGGCGTCCATTGCGCCATCgg   <  1:464332/101‑1 (MQ=255)
                                                                                                    tACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCGGCGCCGGTTTCAGCATGTTTCCGGCGTCCATTGCGCCATCGGc  >  1:3647042/1‑101 (MQ=255)
                                                                                                    tACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCGCCGGTTTCAGCATGTTTCCGGCGTCCATTGCGCCATCGGc  <  1:4831295/101‑1 (MQ=255)
                                                                                                    |                                                                                                    
TTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCGCCGGTTTCAGCATGTTTCCGGCGTCCATTGCGCCATCGGC  >  NC_000913/2731131‑2731331

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.