Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 66,533 3540 bp→CCCGAGACCCGCACGCGTCGACCTGCA [araD]araB [araD], araA, araB

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 66533 70072 3540 289 [0] [0] 287 [araD]–araB [araD],araA,araB

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 665320 (0.000)206 (0.950)
+CCCGAGACCCGCACGCGTCGACCTGCA
97/146 0.8 100% coding (19/696 nt) araD L‑ribulose‑5‑phosphate 4‑epimerase
?NC_000913 70073 = 0 (0.000)intergenic (‑25/‑314) araB/araC L‑ribulokinase/DNA‑binding transcriptional dual regulator

Only 100 of 289 total aligned reads displayed.

ACAAAGACGCCGCGCTCGCGATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGCGCCAGCGT  >  NC_000913/66432‑66632
                                                                                                    |                                                                                                    
acaAAGACGCCGCGCTCGCGATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCg                                                                                                      >  2:3394199/1‑101 (MQ=255)
acaAAGACGCCGCGCTCGCGATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCg                                                                                                      >  2:2728935/1‑101 (MQ=255)
 cAAAGACGCCGCGCTCGCGATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGc                                                                                                     >  1:6128599‑M1/1‑100 (MQ=255)
   aaGACGCCGCGCTCGCGATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGccc                                                                                                   <  2:4470854‑M1/101‑4 (MQ=255)
     gACGCCGCGCTCGCGCTCAACGGCGCTGACGTTGCCCCATGTGAGCGGGACCAGGTTGTGTTTTGGCAGCGCCAGGCTGGCTTCTAATACCCGGCgcccga                                                                                                 >  2:4209561/1‑96 (MQ=255)
      aCGCCGCGCTCGCGATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgag                                                                                                <  1:2886899‑M1/101‑7 (MQ=255)
         ccgcGCTCGCGATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCGGGTTGGCTTCTAATACCCGGCGcccgagacc                                                                                             >  1:2561454‑M1/1‑92 (MQ=255)
          cgcgCTCGCGATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagaccc                                                                                            <  2:3563951‑M1/101‑11 (MQ=255)
             gcTCGCGATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGAGcccgagccccgca                                                                                         >  2:626057‑M1/1‑88 (MQ=255)
              cTCGCGATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcac                                                                                        <  1:751219‑M1/101‑15 (MQ=255)
              cTCGCGATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcac                                                                                        <  1:1322515‑M1/101‑15 (MQ=255)
                 gcgATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGCTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcg                                                                                     >  2:6128266‑M1/1‑84 (MQ=255)
                 gcgATCAACGGCGCGGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGCTGGCTTCTAATACCCGGCGcccgagacccgcacgcg                                                                                     >  2:661869‑M1/1‑84 (MQ=255)
                  cgATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgt                                                                                    >  2:4278040‑M1/1‑83 (MQ=255)
                  cgATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgc                                                                                    >  2:5181615‑M1/1‑83 (MQ=255)
                   gATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTTGCTTCTAATACCCGGCGcccgagacccgcacgcgtc                                                                                   <  1:5628105‑M1/101‑20 (MQ=255)
                   gATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtc                                                                                   >  1:690960‑M1/1‑82 (MQ=255)
                     tCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcga                                                                                 >  2:1549857‑M1/1‑80 (MQ=255)
                      caccggcGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgac                                                                                <  2:1078448‑M1/98‑23 (MQ=255)
                      cAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgac                                                                                <  2:5940334‑M1/101‑23 (MQ=255)
                       aaCGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgttgacc                                                                               >  1:5890805‑M1/1‑78 (MQ=255)
                        agggcgCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacct                                                                              >  1:6997919‑M1/3‑77 (MQ=255)
                        aCGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacct                                                                              <  2:5963863‑M1/101‑25 (MQ=255)
                        aCGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacct                                                                              <  2:1270835‑M1/101‑25 (MQ=255)
                         cGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctg                                                                             >  2:3646795‑M1/1‑76 (MQ=255)
                          ggCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgcgacccgcacgcgtcgacctgc                                                                            >  1:2223570‑M1/1‑75 (MQ=255)
                          ggCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgc                                                                            >  2:1439910‑M1/1‑75 (MQ=255)
                           gcgcTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgca                                                                           <  1:6035634‑M1/101‑28 (MQ=255)
                            cgcTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcag                                                                          <  1:3262038‑M1/101‑29 (MQ=255)
                            cgcTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcag                                                                          <  1:1888857‑M1/101‑29 (MQ=255)
                              cTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggt                                                                        >  1:6524914‑M1/1‑71 (MQ=255)
                              cTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGATGGCTTCTAATACCAGGCGcccgagacccgaacgcgtcgacctgcaggt                                                                        >  2:6806204‑M1/1‑71 (MQ=255)
                               tGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggta                                                                       <  2:4140874‑M1/101‑32 (MQ=255)
                               tGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggta                                                                       >  2:2785089‑M1/1‑70 (MQ=255)
                                gACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtat                                                                      <  1:4040981‑M1/101‑33 (MQ=255)
                                  cGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATCCCCGGCGcccgagacccgcacgcgtcgacctgcaggtatgg                                                                    <  1:3925177‑M1/101‑35 (MQ=255)
                                  cGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatgg                                                                    <  1:2753630‑M1/101‑35 (MQ=255)
                                   gTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatgga                                                                   <  2:6729291‑M1/101‑36 (MQ=255)
                                       ccccATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaa                                                               >  1:4133036‑M1/1‑62 (MQ=255)
                                       ccccATGTGAGCGTGACCAGGTTGTGGTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgaggcccgcacgcgtcgacctgcaggtatggagaaa                                                               <  2:5863008‑M1/101‑40 (MQ=255)
                                        cccATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaac                                                              <  2:3487020‑M1/101‑41 (MQ=255)
                                          cATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacag                                                            <  2:5643589‑M1/101‑43 (MQ=255)
                                           aTGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagt                                                           <  1:3394199‑M1/101‑44 (MQ=255)
                                           aTGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagt                                                           <  1:502913‑M1/101‑44 (MQ=255)
                                            tgtgAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagta                                                          <  1:5549981‑M1/101‑45 (MQ=255)
                                            tgtgAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagta                                                          <  1:6249448‑M1/101‑45 (MQ=255)
                                             gtgAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtag                                                         >  1:486116‑M1/1‑56 (MQ=255)
                                             gtgAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtag                                                         >  1:5498606‑M1/1‑56 (MQ=255)
                                              tgAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtaga                                                        >  1:656511‑M1/1‑55 (MQ=255)
                                              tgAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtaga                                                        <  2:4024914‑M1/101‑47 (MQ=255)
                                                  cGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagt                                                    >  1:204229‑M1/1‑51 (MQ=255)
                                                  cGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagt                                                    <  2:1757318‑M1/101‑51 (MQ=255)
                                                   gTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagtt                                                   <  1:2253948‑M1/101‑52 (MQ=255)
                                                   gTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagtt                                                   <  2:2273304‑M1/101‑52 (MQ=255)
                                                     gACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgc                                                 >  1:6470843‑M1/1‑48 (MQ=255)
                                                      aCCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcg                                                <  1:6647432‑M1/101‑55 (MQ=255)
                                                         aGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcagggatggagaaacagtagagagttgcgata                                             >  2:5720014‑M1/1‑44 (MQ=255)
                                                            ttGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaa                                          >  2:4885463‑M1/1‑41 (MQ=255)
                                                            ttGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaa                                          <  2:4048660‑M1/101‑61 (MQ=255)
                                                             tgttgtttggctgCACCAGGTTGGCTTCTAATCCCCGGCGcccgagacccgcacgcgtcgccctgcaggtatggagaaacagtagagagttgcgataaaaa                                         <  2:1252428‑M1/96‑62 (MQ=255)
                                                             tgtgTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaa                                         <  2:2642415‑M1/101‑62 (MQ=255)
                                                              gtgtTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaag                                        >  2:6005792‑M1/1‑39 (MQ=255)
                                                              gtgtTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaag                                        >  1:3598427‑M1/1‑39 (MQ=255)
                                                              gtgtTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaag                                        <  2:3159932‑M1/101‑63 (MQ=255)
                                                                 ttttGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgt                                     <  2:1507553‑M1/101‑66 (MQ=255)
                                                                    tGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcagttatggacaaacagtagagagttgcgataaaaagcgtcag                                  <  1:3500028‑M1/101‑69 (MQ=255)
                                                                    tGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcag                                  <  1:110321‑M1/101‑69 (MQ=255)
                                                                    tGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcag                                  >  1:2984338‑M1/1‑33 (MQ=255)
                                                                     ggCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcagg                                 <  2:647847‑M1/101‑70 (MQ=255)
                                                                       cAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggta                               <  2:2406789‑M1/101‑72 (MQ=255)
                                                                       cAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggta                               >  1:5921066‑M1/1‑30 (MQ=255)
                                                                       cAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggta                               >  2:6595738‑M1/1‑30 (MQ=255)
                                                                        aGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtag                              <  2:4653538‑M1/101‑73 (MQ=255)
                                                                          cgcCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtagga                            <  2:5255861‑M1/101‑75 (MQ=255)
                                                                          cgcCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtagga                            <  1:964747‑M1/101‑75 (MQ=255)
                                                                            ccAGGTTGGCTTCTAATACCCGGCGcccgagaccctcacgcgtcgacctgcaggaatggagaaacagaagagagttgcgataaaaagcgtcaggtaggatc                          >  1:3344841‑M1/1‑25 (MQ=255)
                                                                            ccAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggatc                          <  2:1245581‑M1/101‑77 (MQ=255)
                                                                            ccAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggatc                          <  1:2114566‑M1/101‑77 (MQ=255)
                                                                             cAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggatcc                         >  1:987230‑M1/1‑24 (MQ=255)
                                                                              aGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggatccg                        <  2:1720988‑M1/101‑79 (MQ=255)
                                                                              aGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggatccg                        <  2:690960‑M1/101‑79 (MQ=255)
                                                                                gTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggatccgct                      >  1:675928‑M1/1‑21 (MQ=255)
                                                                                 ttGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggatccgcta                     <  2:5484154‑M1/101‑82 (MQ=255)
                                                                                 ttGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaaaagtagagagttgcgataaaaagcgtcaggtaggatccgcta                     >  1:3648932‑M1/1‑20 (MQ=255)
                                                                                     cTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggatccgctaatct                 >  2:2949400‑M1/1‑16 (MQ=255)
                                                                                        cTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggatccgctaatcttat              <  1:4614736‑M1/101‑89 (MQ=255)
                                                                                         tAATACCCGGCGcccgagccccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggatccgctaatcttatg             <  2:2223570‑M1/101‑90 (MQ=255)
                                                                                         tAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggatccgctaatcttatg             >  2:816344‑M1/1‑12 (MQ=255)
                                                                                          aaTACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggcaggatccgctaatcttatgg            >  1:541614‑M1/1‑11 (MQ=255)
                                                                                             aCCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggatccgctaatcttatggata         >  2:5384514‑M1/1‑8 (MQ=255)
                                                                                                cggcGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggatccgctaatcttatggataaaa      >  1:51964‑M1/2‑5 (MQ=255)
                                                                                                cggcGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggatccgctaatcttatggataaaa      <  1:1028609‑M1/100‑97 (MQ=255)
                                                                                                 ggCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggatccgctaatcttatggataaaaa     >  1:7031221‑M1/1‑4 (MQ=255)
                                                                                                 ggCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggatccgctaatcttatggataaaaa     >  2:3802398‑M1/1‑4 (MQ=255)
                                                                                                 ggCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggatccgctaatcttatggataaaaa     >  2:2508244‑M1/1‑4 (MQ=255)
                                                                                                  gcgccctagacccgcacgcgttgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggatgcgctaatcttatggataaaaat    <  2:4508294‑M1/101‑99 (MQ=255)
                                                                                                  gcgcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggatccgctaatcttatggataaaaat    <  2:1961774‑M1/101‑99 (MQ=255)
                                                                                                  gcgcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggatccgctaatcttatggataaaaat    <  1:1360758‑M1/101‑99 (MQ=255)
                                                                                                   cgcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggatccgctaatcttatggataaaaatg   <  2:2098611‑M1/101‑100 (MQ=255)
                                                                                                    gcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggatccgctaatcttatggataaaaatgc  <  1:1661902‑M1/101‑101 (MQ=255)
                                                                                                    |                                                                                                    
ACAAAGACGCCGCGCTCGCGATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGCGCCAGCGT  >  NC_000913/66432‑66632

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: