BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,600,532	C→T	W117* (TGG→TAG)	yjjP ←	inner membrane protein, H‑NS‑repressed, DUF1212 family

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,600,532	0	C	T	100.0%	1334.6 / NA	332	W117* (TGG→TAG)	yjjP	inner membrane protein, H‑NS‑repressed, DUF1212 family
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (172/160); total (172/160)

Only 100 of 343 total aligned reads displayed.

TCGTACTGGCAAAGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCCATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGCTGGAC  >  NC_000913/4600434‑4600629

tCGTACTGGCAAAGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTAt                                                                                                 <  1:1261422/101‑1 (MQ=255)

  gTACTGGCAAAGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTATACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCt                                                                                               <  1:7047764/101‑1 (MQ=255)

    ccgggCAAAGAAGGTGCTGACGGCACCACCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTg                                                                                             <  2:834000/98‑1 (MQ=255)

     cTGGCAAAGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTgg                                                                                            >  2:5858238/1‑101 (MQ=255)

      tGGCAAAGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAAAAGGGGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTggg                                                                                           >  2:24387/1‑101 (MQ=255)

       ggCAAAGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGt                                                                                          >  2:591097/1‑101 (MQ=255)

         cAAAGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTaa                                                                                        <  1:1409552/101‑1 (MQ=255)

          aaaGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAAc                                                                                       >  1:1508948/1‑101 (MQ=255)

          aaaGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAAc                                                                                       <  2:2871229/101‑1 (MQ=255)

          aaaGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAAc                                                                                       <  1:5359816/101‑1 (MQ=255)

          aaaCAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGGGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGCAAc                                                                                       >  2:2116261/1‑101 (MQ=255)

           aagaagGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACg                                                                                      <  1:4607318/101‑1 (MQ=255)

           aagaagGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACg                                                                                      <  2:2587098/101‑1 (MQ=255)

           aagaagGTGATGACGGCACCATCCCAGCCACCGTTATTGACTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACg                                                                                      <  1:4496588/101‑1 (MQ=255)

              aagGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGCCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTaa                                                                                   <  1:3534277/101‑1 (MQ=255)

               agGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAAt                                                                                  <  2:3404740/101‑1 (MQ=255)

                 gTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATgg                                                                                <  1:1135673/101‑1 (MQ=255)

                   gatgaCGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCt                                                                              >  2:1295813/1‑101 (MQ=255)

                   gatgaCGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCt                                                                              >  1:6580721/1‑101 (MQ=255)

                      gaCGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGaa                                                                           >  1:6222834/1‑101 (MQ=255)

                       aCGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAAt                                                                          <  1:5388857/101‑1 (MQ=255)

                        cGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAAtt                                                                         >  2:3227109/1‑101 (MQ=255)

                        cGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAAtt                                                                         <  1:938140/101‑1 (MQ=255)

                         ggCCCCAGCCCAGCCGCCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCACCTATCTTGGGTAACGTAATGGCTGAAttt                                                                        <  2:4747134/101‑1 (MQ=255)

                         ggCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAAttt                                                                        >  1:3245892/1‑101 (MQ=255)

                         ggCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAAttt                                                                        <  2:6694002/101‑1 (MQ=255)

                         ggCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAAttt                                                                        >  2:2488213/1‑101 (MQ=255)

                          gcgccATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTg                                                                       <  2:1967623/98‑1 (MQ=255)

                          gCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTg                                                                       >  1:6173472/1‑101 (MQ=255)

                                ccccAGGCACCGTTATTTAGTTTACAGAAACAGGCGCAAGGAAGGCCAACCCTTAAGGCTCACCGCTTTCCTGGGTAACGTAATGGCTGAATTTGGCTaaa                                                                 <  2:888162/100‑1 (MQ=255)

                                 cccAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAAt                                                                >  2:1829716/1‑101 (MQ=255)

                                 cccAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAAt                                                                <  1:513503/101‑1 (MQ=255)

                                   taGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTTAATTTGGCTAAATCg                                                              <  2:376805/100‑1 (MQ=255)

                                   cAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGCCTGAATTTGGCTAAATCg                                                              >  2:1729955/1‑101 (MQ=255)

                                    aGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGt                                                             >  1:6678340/1‑101 (MQ=255)

                                     gCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGtt                                                            <  1:5630355/101‑1 (MQ=255)

                                     gCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGtt                                                            <  1:3728910/101‑1 (MQ=255)

                                       cACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTtc                                                          >  2:5071281/1‑101 (MQ=255)

                                         ccGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTtctc                                                        >  1:2483113/1‑101 (MQ=255)

                                          cGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTctct                                                       <  2:5371420/101‑1 (MQ=255)

                                          cGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTctct                                                       >  1:1697480/1‑101 (MQ=255)

                                          cGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTctct                                                       >  1:652442/1‑101 (MQ=255)

                                          cGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTctct                                                       >  1:3931828/1‑101 (MQ=255)

                                           gTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTa                                                      >  1:520579/1‑101 (MQ=255)

                                           gTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTa                                                      >  2:3497148/1‑101 (MQ=255)

                                            gtATTCAGTTTACAGAAACAGGCCCAAGATAGCCCAACCATTAATGCTGCCAGCTATCTTGGGCAACATAATGGCTGAATTTGGCTAAATCGTTTCTCTAc                                                     <  2:692956/100‑1 (MQ=255)

                                             tATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACg                                                    <  2:4015405/101‑1 (MQ=255)

                                             tATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACg                                                    >  1:361331/1‑101 (MQ=255)

                                              aTTGAGTTTACAGAAACAGGCGCAAGAAAGGCCATCCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGc                                                   <  1:2943225/101‑1 (MQ=255)

                                              aTTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGc                                                   <  1:1781983/101‑1 (MQ=255)

                                                tGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCt                                                 <  2:10780/101‑1 (MQ=255)

                                                  aGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCttt                                               <  1:6285959/101‑1 (MQ=255)

                                                   gTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTg                                              <  1:3795997/101‑1 (MQ=255)

                                                    tttACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGt                                             <  2:6025964/101‑1 (MQ=255)

                                                         aGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATcc                                        >  1:693227/1‑101 (MQ=255)

                                                         aGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATcc                                        >  2:6386907/1‑101 (MQ=255)

                                                          gAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCca                                       <  1:403934/101‑1 (MQ=255)

                                                          gAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCca                                       <  2:2185282/101‑1 (MQ=255)

                                                           aaaCAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCcag                                      >  1:2367135/1‑101 (MQ=255)

                                                           aaaCAGGCGCAAGAAACGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCcac                                      >  2:5790771/1‑100 (MQ=255)

                                                            aaCAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCcagc                                     <  1:2666141/101‑1 (MQ=255)

                                                            aaCAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCcagc                                     >  1:5942669/1‑101 (MQ=255)

                                                             aCAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCcagca                                    <  2:5417328/101‑1 (MQ=255)

                                                              cAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTctct                                                       >  1:61228/1‑81 (MQ=255)

                                                               aGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAga                                  >  2:6323624/1‑101 (MQ=255)

                                                                ggCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAgat                                 <  1:4684614/101‑1 (MQ=255)

                                                                ggCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAgat                                 <  2:4700913/101‑1 (MQ=255)

                                                                 gcgcAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAgatg                                <  2:665339/101‑1 (MQ=255)

                                                                 gcgcAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAgatg                                >  2:4248811/1‑101 (MQ=255)

                                                                  cgcAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAgatga                               >  2:1578048/1‑101 (MQ=255)

                                                                   gcAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAgatgat                              <  2:3908723/101‑1 (MQ=255)

                                                                    cAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGatgatg                             <  1:3978591/101‑1 (MQ=255)

                                                                     aaGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGc                            >  2:5208010/1‑101 (MQ=255)

                                                                     aaGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGc                            >  1:2257523/1‑101 (MQ=255)

                                                                     aaGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGc                            >  2:3078947/1‑101 (MQ=255)

                                                                      aGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCt                           <  1:5993949/101‑1 (MQ=255)

                                                                       ggaaGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTc                          >  2:3162684/3‑101 (MQ=255)

                                                                        aaaGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTcc                         >  1:2889830/1‑101 (MQ=255)

                                                                        aaaGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTcc                         >  1:1459581/1‑101 (MQ=255)

                                                                         aaGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCg                        >  1:3372861/1‑101 (MQ=255)

                                                                         aaGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCg                        >  1:547563/1‑101 (MQ=255)

                                                                           ggCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCa                      >  1:5089794/1‑101 (MQ=255)

                                                                            gCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCaa                     <  1:2156447/101‑1 (MQ=255)

                                                                            gCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATCGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCaa                     >  1:5892956/1‑101 (MQ=255)

                                                                              cAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGa                   >  2:442597/1‑101 (MQ=255)

                                                                              cAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGa                   >  1:4258582/1‑101 (MQ=255)

                                                                                 ccATTAATGCTACTAGCTATCTTGGGTAACGTAAAGGATGCGTAAGGCTAAATCGTTTCCCTACGCCTTTATAATCCAGCAGATGATGCTGCGCTAGGATc                >  2:3657142/1‑101 (MQ=255)

                                                                                 ccATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATc                >  2:4953025/1‑101 (MQ=255)

                                                                                   aTTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATcac              >  2:2757362/1‑101 (MQ=255)

                                                                                    ttAAGGCTACCAGCTATCTTGGGTACCGTAATGGCTGAATTTGGCTCAATCGTTTCTCTCCGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATcaca             <  2:6848746/101‑1 (MQ=255)

                                                                                    ttAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATcaca             <  1:1897393/101‑1 (MQ=255)

                                                                                      aaGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAAt           >  1:3091377/1‑101 (MQ=255)

                                                                                      aaGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAAt           <  1:2094916/101‑1 (MQ=255)

                                                                                       aGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAAtg          <  2:4375129/101‑1 (MQ=255)

                                                                                          cTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGc       >  2:5597817/1‑101 (MQ=255)

                                                                                          cTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGc       <  1:1319465/101‑1 (MQ=255)

                                                                                          cTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGc       <  1:4388450/101‑1 (MQ=255)

                                                                                           tACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGCt      >  1:1040614/1‑101 (MQ=255)

                                                                                           tACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGCt      >  1:4798659/1‑101 (MQ=255)

                                                                                             ccAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGCTgg    <  1:2618147/101‑1 (MQ=255)

TCGTACTGGCAAAGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCCATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGCTGGAC  >  NC_000913/4600434‑4600629

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`