breseq  version 0.35.4  revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log

Marginal new junction evidence (sorted from low to high skew)
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4546998136 (1.200)3 (0.030) 3/486 NT 2.2% coding (1903/2637 nt) fimD type I fimbriae usher protein
?NC_000913 4547003 = 132 (1.180)coding (1908/2637 nt) fimD type I fimbriae usher protein
* ? NC_000913 3800532 =125 (1.100)3 (0.030) 3/488 NT 2.5% coding (434/699 nt) waaY lipopolysaccharide core heptose (II) kinase
?NC_000913 3800664 = 111 (0.990)coding (302/699 nt) waaY lipopolysaccharide core heptose (II) kinase
* ? NC_000913 2524828 =104 (0.920)3 (0.030) 3/486 NT 2.8% coding (51/834 nt) xapA xanthosine phosphorylase
?NC_000913 2524837 = 106 (0.950)coding (42/834 nt) xapA xanthosine phosphorylase
* ? NC_000913 = 164892988 (0.780)3 (0.030) 3/492 NT 3.3% coding (107/219 nt) ydfC Qin prophage; uncharacterized protein YdfC
?NC_000913 1648933 = 89 (0.790)coding (111/219 nt) ydfC Qin prophage; uncharacterized protein YdfC
* ? NC_000913 = 217135114 (1.000)4 (0.040) 3/476 NT 3.5% coding (1641/1719 nt) proS proline‑‑tRNA ligase
?NC_000913 = 217144 111 (1.010)coding (1632/1719 nt) proS proline‑‑tRNA ligase