mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (sorted from low to high skew) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2877973 | 206 (0.910) | 4 (0.020) | 4/432 | 14.8 | 2.1% | intergenic (+355/+596) | iap/cas2 | alkaline phosphatase isozyme conversion protein/CRISPR‑associated endoribonuclease Cas2 |
| ? | NC_000913 | 2878035 = | 194 (0.980) | intergenic (+417/+534) | iap/cas2 | alkaline phosphatase isozyme conversion protein/CRISPR‑associated endoribonuclease Cas2 | |||||
| * | ? | NC_000913 | 2997112 = | NA (NA) | 4 (0.020) | 4/468 | 15.5 | 15.4% | noncoding (580/1331 nt) | IS2 | repeat region |
| ? | NC_000913 | 2997478 = | 23 (0.100) | noncoding (214/1331 nt) | IS2 | repeat region | |||||
| * | ? | NC_000913 | 2069692 = | NA (NA) | 4 (0.020) | 4/468 | 15.5 | 18.1% | noncoding (580/1331 nt) | IS2 | repeat region |
| ? | NC_000913 | 2070058 = | 19 (0.080) | noncoding (214/1331 nt) | IS2 | repeat region | |||||
| * | ? | NC_000913 | 1468661 = | NA (NA) | 4 (0.020) | 4/468 | 15.5 | 18.1% | noncoding (580/1331 nt) | IS2 | repeat region |
| ? | NC_000913 | 1469027 = | 19 (0.080) | noncoding (214/1331 nt) | IS2 | repeat region | |||||
| * | ? | NC_000913 | = 4498394 | 16 (0.070) | 3 (0.010) | 3/468 | 16.2 | 16.4% | noncoding (214/1331 nt) | IS2 | repeat region |
| ? | NC_000913 | = 4498760 | NA (NA) | noncoding (580/1331 nt) | IS2 | repeat region | |||||
| * | ? | NC_000913 | = 3186309 | 22 (0.100) | 3 (0.010) | 3/468 | 16.2 | 12.5% | noncoding (214/1331 nt) | IS2 | repeat region |
| ? | NC_000913 | = 3186675 | NA (NA) | noncoding (580/1331 nt) | IS2 | repeat region | |||||
| * | ? | NC_000913 | = 381473 | 15 (0.070) | 3 (0.010) | 3/468 | 16.2 | 17.3% | noncoding (214/1331 nt) | IS2 | repeat region |
| ? | NC_000913 | = 381839 | NA (NA) | noncoding (580/1331 nt) | IS2 | repeat region | |||||
| * | ? | NC_000913 | = 578171 | 258 (1.140) | 3 (0.010) | 3/490 | 16.6 | 1.1% | coding (65/462 nt) | rzpD | DLP12 prophage; putative prophage endopeptidase RzpD |
| ? | NC_000913 | 578175 = | 262 (1.160) | coding (69/462 nt) | rzpD | DLP12 prophage; putative prophage endopeptidase RzpD | |||||