| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,529,203 | C→A | 10.1% | pseudogene (1314/2049 nt) | rhsE → | RhsE protein in rhs element |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,529,203 | 0 | C | A | 10.1% | 336.9 / 18.6 | 126 | pseudogene (1314/2049 nt) | rhsE | RhsE protein in rhs element |
| Reads supporting (aligned to +/- strand): ref base C (38/72); new base A (8/5); total (47/79) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.21e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.33e-01 | |||||||||||
Only 100 of 128 total aligned reads displayed.
TCGAGACAGAGAACGGCGAGCGGGAAAAAGCGCAGCGGCGCAGCCTGGCAGAGACGCTCCAGCAGGAAGGGAGTGAGAACGGCCACGGCGTGGTGTTCCCGGCTGAACTGGTGCGGCTGCTGGACAGGCTGGAGGAAGAAATCCGGGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAAT‑‑ACACACCGGCGCGAAAAGTTCATTTTTACCACTGCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCG‑CATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTATCCGTTGAATCCCATACAAGTGATAGACCCAAT > NC_000913/1528923‑1529481 | tCGAGACAGAGAACGGCGAGCGGGAAAAAGCGCAGCGGCGCAGCCTGGCAGAGACGCTCCAGCAGGAAGGGAGTGAGAACGGCCACGGCGTGGTGTTCCCGGCTGAACTGGTGCGGCTGCTGGCCAGGCTGGCGGTAGAAATCCGGGCAGACCGCGTGCGCCGTGAAAGCCGGGCGTGGCTTGCGCAGGGCGGGCTGACGGTGGAGCAACGGGCCAGCACGGTGGAGCCGGAAT‑‑ACAAACCGGCGAGCAAAGTTCATTTTTACCACTCCGACCACGGGGGc > 2:80964/1‑281 (MQ=11) agaCAGAGAACGGCGAGCGGGAAAAAGCGCAGCGGCGCAGCCTGGCAGAGACGCTCCAGCAGGAAGGGAGTGAGAACGGCCACGGCGTGGTGTTCCCGGCTGAACTGGTGCGGCTGCTGGACAGGCTGGAGGAAGAAATCCGGGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAAT‑‑ACACACCGGCGCGAAAAGTTCATTTTTACCACTGCGACCACCGGGGCCTg > 1:477712/1‑281 (MQ=34) agaCAGAGAACGGCGAGCGGGAAAAAGCGCAGCGGCGCAGCCTGGCAGAGACGCTCCAGCAGGAAGGGAGTGAGAACGGCCACGGCGTGGTGTTCCCGGCTGAACTGGTGCGGCTGCTGGACAGGCTGGAGGAAGAAATCCGGGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGGTGAGCAACTGGCCAGACAGGTGGAGCCGGACT‑‑ACACACCGGCGCGAAAAGTGCATTTTTACCACTGCCACCACCGGGGcca > 2:879440/1‑279 (MQ=19) gAGCGGGAAAAAGCGCAGCGGCGCAGCCTGGCAGAGACGCTCCAGCAGGAAGGGAGTGAGAACGGCCACGGCGTGGTGTTCCCGGCTGAACTGGTGCGGCTGCTGGACAGGCTGGAGGAAGAAATCCGGGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAAT‑‑ACACACCGGCGCGAAAAGTTCATTTTTACCACTGCGACCACCGGGGCCTGCCGCTGgcg < 1:730895/276‑1 (MQ=34) aGCGGGAAAAAGCGCAGCGGCGCAGCCTGGCAGAGACGCTCCAGCAGGAAGGGAGTGAGAACGGCCACGGCGTGGTGTTCCCGGCTGAACTGGTGCGGCTGCTGGACAGGCTGGAGGAAGAAATCCGGGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACACCGGCGCGAAAAGTTCATTTTTACCACTGCGACCACCGGGGCCTGCCGCTGGCGCtta > 1:7143/1‑279 (MQ=18) gCGGGAAAAAGCGCAGCGGCGCAGCCTGGCAGAGACGCTCCAGCAGTAAGGGAGTGAGAACGGCCACGGCGTGGTGTTCCCGGCTGAACTGGTGCGGCTGCTGGACAGGCTGGAGGAAGAAATCCGGGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAAT‑‑ACACACCGGCGCGAAAAGTTCATTTTTACCACTGCGACCACCGGGGCCTGCCGCTGGCGCtcatc < 1:678788/280‑1 (MQ=25) gCGGGAAAAAGCGCAGCGGCGCAGCCTGGCAGAGACGCTCCAGCAGGAAGGGAGTGAGAACGGCCACGGCGTGGTGTTCCCGGCTGAACTGGTGCGGCTGCTGGACAGGCTGGAGGAAGAAATCCGGGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAAT‑‑ACACACCGGCGCGAAAAGTTCATTTTTACCACTGCGACCACCGGGGCCTGCCGCTGGCGCtcatca > 1:1039333/1‑281 (MQ=35) aaaaGCGCAGCGGCGCAGCCTGGCAGAGACGCTCCAGCAGGAAGGGAGTGAGAACGGCCACGGCGTGGTGTTCCCGGCTGAACTGGTGCGGCTGCTGGACAGGCTGGAGGAAGAAATCCGGGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAAT‑‑ACACACCGGCGCGAAAAGTTCATTTTTACCACTGCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGaa < 2:506194/280‑1 (MQ=35) aggcgcAGCGGCGCAGCCTGGCAGAGACGCTCCAGCAGGAAGGGAGTGAGAACGGCCACGGCGTGGTGTTCCCGGCTGAACTGGTGCGGCTGCTGGACAGGCTGGAGGAAGAAATCCGGGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAAT‑‑ACACACCGGCGCGAAAAGTTCATTTTTACCACTGCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGa < 1:429196/278‑1 (MQ=25) aaGCGCAGCGGCGCAGCCTGGCAGAGACGCTCCAGCAGGAAGGGAGTGAGAACGGCCACGGCGTGGTGTTCCCGGCTGAACTGGTGCGGCTGCTGGACAGGCTGGAGGAAGAAATCCGGGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAAT‑‑ACACACCGGCGCGAAAAGTTCATCTTTACCACTGCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGa < 1:580086/280‑1 (MQ=18) aaGCGCAGCGGCCACGCTTGGCAGCGACGCGCCGGCAGGAAGGGAGTGAGAACGGCCACGGCGTGGTGTTCCCGGCTGAACTGGTGCGGCTGCTGGACAGGCTGGAGGAAGAAATCCGGGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAAT‑‑ACACACCGGCGCGAAAAGTTCATTTTTACCACTGCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGa < 1:622951/280‑1 (MQ=255) gcggcgCAGCCTGGCAGAGACGCTCCAGCAGGAAGGGAGTGAGAACGGCCACGGCGTGGTGTTCCCGGCTGAACTGGTGCGGCTGCTGGACAGGCTGGAGGAAGAAATCCGGGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGGGCCGGACT‑‑AGACACCGGCGCGAAAAGTTCATTTTTACCACTGCCACCACCGGGGCCGGCCGCTGGCGGCCAGCAGCGAAGACGGCagt > 2:280653/1‑278 (MQ=255) accgggcgggCAGGGGCGGTCCGGCAGGAAGGGAGTGAGGACGGCCACGGCGTGGTGTTCCCGGCGGAACTGGTGCGGCTGCTGGACAGGCGGGAGGAAGAAATCCGGGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAAT‑‑ACACACCGGCGCGAAAAGTTCATTTTTACCACTGCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGc < 2:764020/273‑1 (MQ=11) gcAGCCTGGCAGCGACGCTCCAGCAGGAAGGGAGTGAGAACGGCCACGGCGTGGTGTTCCCGGCTGAACTGGTGCGGCTGCTGGACAGGCTGGAGGAAGAAATCCGGGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAAT‑‑ACACACCGGCGCGAAAAGTTCATTTTTACCACTGCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGc < 1:150941/280‑1 (MQ=25) tGGCAGAGACGCTCCAGCAGGAAGGGAGTGAGAACGGCCACGGCGTGGTGTTCCCGGCTGAACTGGTGCGGCTGCTGGACAGGCTGGAGGAAGAAATCCGGGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAAT‑‑ACACAACGGCGCGAAAAGTTCATTTTTACCACCGCGACCCCCGGGGCCTGCCGCTGGCGCTCCTCCGCGAAGACGGCAATACGGCGTGgccg > 2:882617/1‑279 (MQ=255) gcaaggaCGCTCCAGCAGGAAAGAGGTGGGAACGCCCACGGCGTGGTGTTCCCGGCTGAACTGGTGCGGCTGCTGGACAGGCTGGAGGAAGAAATCCGGGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAAT‑‑ACACACCGGCGCGAAAAGTTCATTTTTACCACTGCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGcgcg < 1:171825/275‑1 (MQ=255) gCAGAGCCGCTCCAGCAGGAAGGGAGGGGGAACGGCCACGGCGTGGTGTTCCCTGCTGAACTGGGGCGGCTGCTGGACGGGCTGGAGGAAGAAATCCGGGCAGACCGCGTGAGCAGTGAAAGCCGGGCAGGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGTAAT‑‑ACACACCGGCGCGAAAAGTTCATTTTTACCACTGCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGcgcg < 2:465386/280‑1 (MQ=255) gCAGAGACGCTCCAGCAGGAAGGGAGTGAGAACGGCCACGGCGTGGTGTTCCCGGCTGAACTGGTGCGGCTGCTGGACAGGCTGGAGGAAGAAATCCGGGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAAT‑‑ACACACCGGCGCGAAAAGTTCATTTTTACCACTGCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGcgcg < 1:882617/280‑1 (MQ=37) cAGAGACGCTCCAGCAGGAAGGGAGTGAGAACGGCCACGGCGTGGTGTTCCCGGCTGAACTGGTGCGGCTGCTGGACAGGCTGGAGGAAGAAATCCGGGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAAT‑‑ACACACCGGCGCGAAAAGTTCATTTTTACCACTGCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCggg < 1:307566/281‑1 (MQ=38) aggaccacaccAGCAGGAAGGGAGGGGGAAGGGCCAAGGCGTGGTGTGCCCGGCTGAACTGGTGCGGCTGCTGGACAGGCTGGAGGAAGAAATCCGGGCAGACCGGGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAAT‑‑ACACACCGGCGCGAAAAGTTCATTTTTACCACTGCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCggg < 2:368438/271‑1 (MQ=255) aCGCTCCAGCAGGAAGGGAGTGAGAACGGCCACGGCGTGGTGTTCCCGGCTGAACTGGTGCGGCTGCTGGACAGGCTGGAGGAAGAAATCCGGGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAAT‑‑ACACACCGGCGCGAAACGTTCATTTTTACCACTGCGACCACCGGGGCCCGCCGCTGGCCCTCATCAGCGAAAACGGCAATACGGCGt > 1:764020/1‑268 (MQ=255) aCGCTCCAGCAGGAAGGGAGTGAGAACGGCCACGGCGTGGTGTTCCCGGCTGAACTGGTGCGGCTGCTGGACAGGCTGGAGGAAGAAATCCGGGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGGGGAGCAACTGGCCAGACAGGTGGCGCCGGAAT‑‑ACACACCGGCGCGAAAAGATCATTTTTACCACTGCGACCACCGGGGACTGCGCCGGGCGCCCAGCAGCGAAGAGGGCAATCGGACGTGGGGCGGGGGGTa > 2:771504/1‑281 (MQ=11) tCCAGCAGGAAGGGAGTGAGAACGGCCACGGCGTGGTGTTCCCGGCTGAACTGGTGCGGCTGCTGGACAGGCTGGAGGAAGAAATCCGGGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAAT‑‑ACACACCGGCGCGAAAAGTTCATTTTTACCACTGCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTatga > 1:368438/1‑280 (MQ=39) tCCAGCAGGAAGGGAGTGAGAACGGCCACGGCGTGGTGTTCCCGGCTGAACTGGTGCGGCTGCTGGACAGGCTGGAGGAAGAAATCCGGGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAAT‑‑ACACACCGGCGCGAAAAGTTCATTTTTACCACTGCGACCACCGGGGCCTGCCGCTGGCGCCCATCAGCGAAGGCGGCAATACGGCGGGGCGCGGGGAGTagtgt > 2:857283/1‑277 (MQ=255) aGTGAGAACGGCCACGGCGTGGTGTTCCCGGCTGAACTGGTGCGGCTGCTGGACAGGCTGGAGGAAGAAATCCGGGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAAT‑‑ACACACCGGCGCGAAAAGTTCATTTTTACCACTGCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCaa < 1:914106/278‑1 (MQ=39) tGAGAACGGCCACGGCGTGGTGTTCCCGGCTGAACTGGTGCGGCTGCTGGACAGGCTGGAGGAAGAAATCCGGGCAGACCGCGTGAGCAGTGCAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGATCAACTGGCCCGATAGGTGGAGCCTGAAT‑‑ACACACCGGCGCGAAAAGTTCATTTCTGCCACTGCGACGACCGGGGACTGCCGCGGGCGCTCCTTATCGAAGACGCCAATAAGGGGTGGCGAGGGGGGTATGCTGAGTGGGGAAACGAga > 2:21416/1‑280 (MQ=11) tGAGAACGGCCACGGCGTGGTGTTCCCGGCTGAACTGGTGCGGCTGCTGGACAGGCTGGAGGAAGAAATCCGGGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGTAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAAT‑‑ACACACCGGCGCGAAAAGTTCATTTTTTCCACTGCGACCACCGGGGCCTGCCGCTGGCGCTCCTCACCGAAGACGGTAATACGGCGTGGCGCGGGGCGGGTGCAGAATGGGGCAACCAGc > 1:1004168/1‑281 (MQ=14) gaACGGCCACGGCGTGGTGTTCCCGGCTGAACTGGTGCGGCTGCTGGACAGGCTGGAGGAAGAAATCCGGGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAAT‑‑ACACACCGGCGCGAAAAGTTCATTTTTACCACTGCGACCACCGGGGCCTGCCGCCGGCGCCCCTCAGCGAAGACGGCAATACGGCGGGGCGCGGGGCGGGTGAGGAAGGGGGCAACACGCttc > 2:211810/1‑280 (MQ=14) gCCACGGCGTGGTGTTCCCGGCTGAACTGGTGCGGCTGCTGGACAGGCTGGAGGAAGAAATCCGGGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAAT‑‑ACACACCGGCGCGAAAAGTTCATTTTTACCACTGCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGACAACGGCAATAAGGCGGGGGGCGGGGGGTAGGAAGAATGGGCGAACACGCTTaaggg > 2:341128/1‑277 (MQ=11) ccACGGCGTTGTGTTCCCGGCTGAACTGGTGCGGCTGCTGGACAGGCTGGAGGAAGAAATCCGGGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAAT‑‑ACACACCGGCGCGAAAAGTTCATTTTTACCGCTGCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATgag < 1:415207/280‑1 (MQ=255) cGGCGTGGTGTTCCCGGCTGAACTGGTGCGGCTGCTGGACAGGCTGGAGGAAGAAATCCGGGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAAT‑‑ACACACCGGCGCGAAAAGTTCATTTTTACCACTGCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGCTGAATGGGGCAACCAGCTTAATgaggag > 1:186411/1‑280 (MQ=39) ggCTTGGTGTTCCCGGCTGAACTGGTGCGGCTCCTGAACCAGCTCAAGGAATCAATCCGGGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAAT‑‑ACACACCGGCGCGAAAAGTTCATTTTTACCACTGCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGaa < 1:717232/281‑1 (MQ=255) ggtgTTCCCGGCTGAACTGGTGCGGCTGCTGGACAGGCTGGAGGAAGCAATCCGGGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAAT‑‑ACACACCGGCGCGAAAAGTTCATTTTTACCACTGCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCG‑c < 1:258645/281‑1 (MQ=39) ggtgTTCCCGGCTGAACTGGTGCGGCTGCTGGACAGGCTGGAGGAAGAAATCCGGGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAAT‑‑ACACACCGGCGCGAAAAGTTCATTTTTACCACTGCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCG‑c < 1:857283/281‑1 (MQ=39) ggtgTTCCCGGCTGAACTGGTGCGGCTGCTGGACAGGCTGAAGGAAGAAATCCGGGCAGACCGCGTGGGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAAT‑‑ACACACCGGCGCGAAAAGTTCATTTTTACCACTGCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCG‑c < 1:195372/281‑1 (MQ=255) gggtTCCCGGATGGACTGGGGCGGCTGCGGGACGAGCGGGGTGAATAAGTACGGGGAGAACGCGTGAGCAGTGGAAGCCGTGCGTGTCTTGCGCGGGGCGGGACGACGGGGGAGGAACGTGCCAGGCAGTTGGAACCTGAAT‑‑AGACACCGGCGCGAAAAGTTCATTGTTACCACTGCGACCCCCGGGGCCTGCCTCTGGAGCTCATCCGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCG‑Ca < 2:570420/279‑1 (MQ=14) ggCTGAACTGGTGCGGCTGCTGGACAGGCTGGCGGAAGAAATCCGGGCAGACCGCGTGAGCAGTGAACGCCGGGCGTGGCTTGCGCAGTGCGGGCTGCCGGTGGAGAAACCGGCCAGAAGGGTGGAGCCGGAAT‑‑GCACACCGGCGTGAACAGTTCATTTTTACCAGTGAGACCACCGGGGCAGGCCGCTGGCGCTCATAAGCGGAGAAGGCAATACGTCGTGGCGCGGGGGGTATGGTGGATGGGACAAGCAGAGTAAAGAGGCAACCTCG‑CAGTACCTGc > 2:446613/1‑281 (MQ=14) gCTGATCGGGTGCTGCGGCTGGGCGTGCTGGAGGAAAGAATCGGGGCTGACCGGCTGAGCAGGCAAGGCCGGGCGGGGCTTGCGCAGTGCGGGCTGGCGGTGCAGACACTGGCCAGACAGGTGGCGCCGGACT‑‑GCAAACCGGCGCGATAAGTTCATTTTTACCACTGCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCG‑CATCACCTGc < 2:233077/280‑1 (MQ=14) gCTGAAGTGGTGCGGCTTCTGGACAGGCTGGAGGAGGAAATCCGGGCAGACCGCGTGGGCAGTGAAAGCCGGGCGTGGCTTACGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAAT‑‑ACACACCGGCGCGAAAAGTTCATTTTTACCACTGCGACCACCGGGGCCTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGGGAACCCG‑CATCACCTGc < 1:742581/280‑1 (MQ=255) cTGAACTGGTGCGGCTGCTGGACAGGCTGGAGGAAGAAATCCGGGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGGGGAGCAACTGGCCAGACAGGTGGAGCCGGAAT‑‑ACACACCGGCGCGAAAAGTTCATTTTTACCACTGCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCG‑CATCACCTGCAc < 2:745280/281‑1 (MQ=255) gAACTGGGTCGGCTGCTGGACAGGCTGGAGGAAGAAAGCCGGGCAGACCGCGTGGGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAAT‑‑ACACACCGGCGCGAAAAGTTCATTTTTACCACTGCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAGGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCG‑CATCACCTGCACCa < 1:953705/281‑1 (MQ=255) ggCTGGAGGAAGAAATCCGGGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAAT‑‑ACACACCGGCGCGAAAAGTTCATTTTTACCACTGCGACCACCCGGGCCTGCCGCTGGCGCTCATCAGCTAAGACGGCAATACGCCGTGGCGCGGGGCGGATGATGAATGGGGCAACCAGCTTAAAGAGGGGAACCCG‑CATCCCCCGCACCAGCCGGACCGTCTGCCAGGgca > 2:834292/1‑280 (MQ=14) tGGAGGAAGAAATCCGGGCAGACCGCGTGAGCCGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAAT‑‑ACACACCGGCGCGAAAAGTGCATTTTTACCACTGCGACCACCGGGCCCTGCCGCTGGCGCCCATCAGCGAATACGGCAAGACGGCGTGGCGCGGGGCGTACGCTGAACGTGGCAACCAGCTTAATGAGGAGAACCGG‑CAACACCTGCCCCAGCCGCAACGTCGGCCAGGgctggag > 2:110801/1‑276 (MQ=14) ggggggaggacagccGGGGAGACCGCGTGAGCAGTGAAGGCGGGGGGTGGCTTGCGCAGTGCGGGCTGCGGGTGGAGCAACGGGCCAGACAGGTGGAGCCGGAAT‑‑ACACACCGGCGCGAAACGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGAAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCG‑CATCACCTGCACCAGCCGTACCGTCTGCCAGGgcagca < 2:802807/267‑1 (MQ=11) aggaAGAAATCCGGGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAAT‑‑ACACACCGGCGCGAAAAGTTCATTTTTACCACTGCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCG‑CATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCat > 1:68524/1‑281 (MQ=255) gaaATCCGGGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAAT‑‑ACACACCGGCGCGAAAAGTTCATTTTTACCACTGCGACCACCGGGGCCTGCCGCAGGCGCTCATCAGCGAAAACGGCAATACGGCGTGGCGCGGGGAGTATGCTGAATGCGGCAACCACCTTAATGAGGAGAACCCG‑CACCACCTGCACCCGCCGTACCGTCTGCCAGGGCAGCAGCAcgatga > 2:832839/1‑281 (MQ=255) cAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAAT‑‑ACACACCGGCGCGAAAAGTTCATTTTTCCCACTGCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCG‑CATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCgggg < 1:680589/281‑1 (MQ=255) cAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAAT‑‑ACACACCGGCGCGAAAAGTTCATTTTTACCACTGCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCG‑CATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCgggg < 1:158344/281‑1 (MQ=255) cAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAAT‑‑ACACACCGGCGCGAAAAGTTCATTTTTACCACTGCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCG‑CATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCgggg < 1:219834/281‑1 (MQ=255) agtcctcgagAGCAGTGAAAGCCCGTCGTGTCTTGCGCAGTGCGGGCTGACGGTGGAGCAATTGGCGAGACAGGTGGAGCCGGAAG‑‑ACACACCGGCGCGAAAGGTTCATTTTTACCGCTGCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATCCGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCG‑CATCACCTGCACCAGCCGTACCGTCTTCCAGGGCAGCAGCATGATGAGGAGTCGGGGc < 2:693583/272‑1 (MQ=14) aGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGGGCAACTGGCCAGACAGGTGGAGCCGGAAT‑‑ACACACCGGCGCGAAAAGTTCATTTTTACCACTGCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCG‑CATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGc < 1:611343/281‑1 (MQ=255) aGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAAT‑‑ACACACCGGCGCGAAAAGTTCATTTTTACCACTGCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCG‑CATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGc < 1:771504/281‑1 (MQ=255) aGACCGCGTGAGCAGTGAAAGCCGGGCGGGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAAT‑‑ACACACCGGCGCGAAAAGTTCATTTTTACCACTGCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCG‑CATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGc < 1:21416/281‑1 (MQ=255) gTGAAAGCCGGGCGTGGCTTGCGCCGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGACGGAAT‑‑ACACACCGGCGCGAAAAGTTCCTTTTTACCACTGCGACCACCGGGGTCTGCCGCTGGCGCTCATCAGCTAAGGCGACAACACGCCGTGGCGCGGGGAGTCTGCTGACTGGGGCAACCAGCGTAATGAGGAGAAACAGACGCCACAT‑CACCAACGGTACCGTCAGCCAGGGCAGCAGCAATAGGAGGGATGGGGTCTGTACGCTAACCg > 2:778108/1‑280 (MQ=14) ggCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAAT‑‑ACACACCGGCGCGAAAAGTTCATTTTTACCACTGCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCG‑CATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACt > 1:457476/1‑281 (MQ=255) gcaaggggCTGACGGTTGAGCAACTGGCCTGGCAGGTGGAGCCGGAAT‑‑ACACACCGGCGCGAAAAGTTCATTTTTACCACTGCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCG‑CATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCa < 1:205874/275‑1 (MQ=255) gCGGGGTGACGGGGGAGCAACTGGCCGGAAAGGTGGAGCCGGAAT‑‑ACACACCGGCGCGAAAAGTTCATTTTTACCACTGCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCG‑CATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAgggg < 1:80964/281‑1 (MQ=255) gCGGGCTGAGGGTGGGGCAACTGGCCAGACAGGTGGAGCCGGAAT‑‑ACACGCCGGCGCGAAAAGTTCATTTTTACTACGGCGACCGCCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCG‑CATCACCTGCACCAGCCGTACCGTCGGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAgggg < 2:876760/281‑1 (MQ=255) gCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAAT‑‑ACACACCGGCGCGAAAAGTTCATTTTTACCACTGCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCG‑CATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAgggg < 1:978656/281‑1 (MQ=255) gCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAAT‑‑ACACACCGGCGCGAAAAGTTCATTTTTACCACTGCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCG‑CATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAggg > 2:359958/1‑280 (MQ=255) gACGGTGGAGCGACTGGCCAGACAGGTGGAGCCGGAAT‑‑ACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCG‑CATCACCTGCACCAGCCGTACCGTCTGCCAGGgcagca < 1:24110/213‑1 (MQ=255) cGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAAT‑‑ACACACCGGCGCGAAAAGTTCATTTTTACCACTGCGACCACCGGGGCCTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCG‑CATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGACCCGTTGCAGGGGCGGTatat > 1:772596/1‑280 (MQ=255) cGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAAT‑‑ACACACCGGCGCGAAAAGTTCATTTTTACCACTGCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGACGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCG‑CATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCCGGTCTATAACCGGCACCGGCACTCCGATCCGTTGCAGGGGCGGTagat > 2:691169/1‑280 (MQ=255) cGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAAT‑‑ACACACCGGCGCGAAAAGTTCATTTTTACCACTGCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGgcgc < 2:502409/128‑1 (MQ=255) cGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAAT‑‑ACACACCGGCGCGAAAAGTTCATTTTTACCACTGCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGgcgc > 1:502409/1‑128 (MQ=255) cGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAAT‑‑ACACACCGGCGCGAAAAGTTCATTTTTACCACTGCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCG‑CATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTatat > 1:974803/1‑280 (MQ=255) cGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAAT‑‑ACACACCGGCGCGAAAAGTTCATTTTTACCACTGCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCG‑CATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCACGATGCGGAGTCGGGGCTGGACTATAACCGTAACCGGCACTCCGATCCGTTGCAGGGGGGGTATGTc > 2:607508/1‑281 (MQ=255) cGGTGCAGCAACTGGCCAGACGGGGGGGGCCGGAAT‑‑ACACCCCGGCGCGACAAGTTCATTTTTACCACTGCGACCACCGGGGCCGGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCG‑CATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTatat < 2:277783/280‑1 (MQ=255) gAGCAACTGGCCAGACAGGTGGAGCCGGAAT‑‑ACACACCGGCGCGAAAAGTTCATTTTTACCACTGCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCG‑CATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCAcccc > 1:50623/1‑281 (MQ=255) aaGCAACTGGCCAGACAGGTGGAGCCGGAAT‑‑ACACACCGGCGCGAAAAGTTCATTTTTACCACTGCGACCACCGGGGCCTGCCGCGGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCG‑CATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCAccc < 1:634481/279‑1 (MQ=255) aacgtgCCAGGAAGGTGGGGCCAGAAT‑‑ACAACCGGGGGCGAAAAGCTCTACTTTATCACGGCGACCACCGGCGGTGGCCGCTGGCGTTTAGCGGCGGAGACGGCAATACGGCGGGGCGCGGGGAGTAGGATGAATGGGGCAACCAGCTTAATGAGGAGAACACG‑CATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTAAGATCCGTTGCAGGGGCGGTATATCACCCCGGa < 2:748525/275‑1 (MQ=14) aCTGGCCAGACAGGTGGAGCCGGAAT‑‑ACACACCGGCGCGAAAAGTTCATTTTTACCACTGCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCG‑CCTCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGACACCGGCACCACGATCCGTTGCAGGGGCGGCATATCACCGCGGAcc > 1:395734/1‑281 (MQ=255) gCCAGACAGGTGGAGCCGGAAT‑‑ACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCG‑CATCACCTGCTCCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGa < 1:391886/280‑1 (MQ=255) gCCAAACAGGTGGGGCCGGAAT‑‑ACACCCCGGGGCGAAAAGTTCATTTTTACCCCTGCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCG‑CATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGa < 2:457476/280‑1 (MQ=255) cagggagagTGGAGCCTGGAT‑‑GCACCCCGGCGCGAAAGGCTCATCTTGATCACTGGTGCCCGCGGGGCCTGCCCCTGGCGCTTATCAGCGAAGACGGCGATACGGCGGGGCGCGGGGAGGATGATGAATGGGGCAACCAACTTAATGGGGATAACCCG‑CATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGAtt < 2:1033778/273‑1 (MQ=14) cAGACAGGTGGAGCCGGAAT‑‑ACACACCGGCGCGAAAAGTTCATTTTTACCACTGCGACCACCGGGGCCTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCG‑CATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTg > 1:884699/1‑281 (MQ=255) cAGACAGGGGGAGCCGGAAC‑‑ACACCCCGGCGCGAAAATTTCATTTTTACCACGGCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCG‑CATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGAtt < 1:913703/280‑1 (MQ=255) gCCGAAAT‑‑ACACACCGGCGCGAAAAGTTCATTTTTACCACTGCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCG‑CATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGagag < 1:550093/278‑1 (MQ=255) ccGGAAT‑‑ACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCG‑CATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCAGGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGAACCGTGGCAGGGGCGGTAGATAACCCCGGACCCGACTgg > 1:1033778/1‑269 (MQ=14) ggcaT‑‑ACCCACCGGCGCAAAAAGTTCATTTTTCCCGCTGCGTCCACCGGGGCCTGCCGCTGGCGCTCATCCGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCG‑CATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGCTCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGtgga < 1:581291/277‑1 (MQ=255) ggAAT‑‑ACACACCGGCGCGAAAAGTTCATTTTTACCACTGCGACCACCGGGGCCTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCG‑CATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGtgga < 2:884699/280‑1 (MQ=255) cgggaaccaccacGGCGCGGAAAGCTCATTTTTACCACTGCGACCACCGGGGCCTGCCGCTGGCGCTCATCCGCGGAGGCGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCG‑CATCACCTGCACCAGCCGTACCGTCTGCCAAGGCAGCAGCATGGTGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGtgg < 2:497098/268‑1 (MQ=17) aatacacacacCGGCGCGAAAAGTTGTTTTTACCCACTGCGACCACCGGGGCCTGCCGCTGGCGCTTATCAGCGAAGGCGGCAATACGGGGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCG‑CATCACCGGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGtgga < 2:7143/275‑1 (MQ=17) gacaaacCGAAGCGAAAAGTTCATTTTTACCACGGCGACCACCGGGGGCTGCCGCTGGCGCTCATCAGCGAAGGCGGCAATACGGGGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCATAATGAGGAGAACCCG‑CATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGAGGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGtggatgga < 1:158094/279‑1 (MQ=25) acgcacCGGCGCGAAAAGTTCATTTTTACCACTGCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCG‑CATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGaa < 2:275935/277‑1 (MQ=255) cGGCGCGAAAAGTTCATTTTTACCACTGCGACCCCCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCG‑CATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTa < 1:834292/280‑1 (MQ=255) cGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCG‑CATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCAGATTGGGTTGAGAGGGGGGTGGAATATGTAt > 2:658935/1‑281 (MQ=255) ggCGCGAAAAGTTCATTTTTACCACTGCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATCAGGAGAACCCG‑CATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGCTGCGAGGTGGATGGAATATGTATc > 1:576619/1‑281 (MQ=255) cgcgAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCG‑CATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGGATATCACACCGGAACCGACTGGGTTGAGAGGTGGATGGAATATGTATCAg > 1:1034367/1‑281 (MQ=255) cgcgAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCCTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAAACAGCTTAATGCGGAGAACCCG‑CATCACCTGCACCAGCCGTACCGTCTGACAGGGCAGCAGCACGATGAGGGGTCGGGGCTGCACTATAACCGTCACCGGCACTACGACCCGTTGAAGGGGGGGTATATCGACCCGGACACGCGCGGGTTGATCGGTGGGTGGGATATGTATccg > 2:620315/1‑279 (MQ=14) agtaaaaGTGCTATTTTACCCCTGCCACCACCAGGGCCTGCCGGTGGCGATAAGCAGCGAAGACGGCAGAACGGCGTGGCGCGGAGAGTAGTATGAAATGGGCAACCAGCGTAATGGGGAAAACCCG‑CATCACCTGCACCCGCCGTACCGTCGACCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTTAGAGGTGGATGGAATATGTATCAGt < 2:1004168/278‑1 (MQ=255) gAAAAGTTCATTTTTACCGCTGCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCG‑CATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTAt < 1:691169/281‑1 (MQ=255) cATTTTTCCCACTGCGACCACCGGGGCCTGCCTCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGTGCAACCAGCTTAATGAGGAGAACCCG‑CATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTATCCGTTGaa < 1:9886/281‑1 (MQ=255) ttttACCTCGGCGACCACCGGGGCCGGCCGCTGGCGCTCATCAGGGAAGACGGGAAGACGGGGTGGCGCGGGGAGAATGATGAATGGGGCAACCAGCTTAAGGAGGAGAACCCG‑CAGCTCCTGAACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTATCCGTTGaa < 2:528405/278‑1 (MQ=18) aCCACTGCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCG‑CATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTATCCGTTGAATCCCa < 1:359958/279‑1 (MQ=255) ccACCGCGACCACCGGGGCCTGCCTCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCG‑CATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTATCCGTTGAATCCCATAc < 1:406596/281‑1 (MQ=255) tGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCG‑CATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCCCCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTATCCGTTGAATCCCATACaat > 1:301325/1‑279 (MQ=255) gCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGTTTAATGAGGAGAACCCG‑CATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATACGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGGTGAGAGTTGGAGGGAat > 2:1004607/1‑248 (MQ=255) cccccGGGTCCTGCCGCCGGCGCTCAGCCGCGAAGACGGGCATACGGCGTGGCGCGGTGAGGATGATGAATTGGCAAACCAGCTTAATAGGGAGAACCCG‑CATAACCTGCCCCAGCCGTAACGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTATCCGTTGAATCCCATACAAGTGATAg < 2:352281/278‑1 (MQ=255) gCCTGCCGCTGACGCTCATCAGCAAAGACGGGAATACGGCGTGGCGCGGGGAGGATGATGAATGGGGCAACCAGCGTAATGAGGAGAACCCG‑AATCACCTGCACCAGCCGGACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTATCCGTTGAATCCCATACAAGTGATAGACCCAAt < 1:320129/280‑1 (MQ=255) | TCGAGACAGAGAACGGCGAGCGGGAAAAAGCGCAGCGGCGCAGCCTGGCAGAGACGCTCCAGCAGGAAGGGAGTGAGAACGGCCACGGCGTGGTGTTCCCGGCTGAACTGGTGCGGCTGCTGGACAGGCTGGAGGAAGAAATCCGGGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAAT‑‑ACACACCGGCGCGAAAAGTTCATTTTTACCACTGCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCG‑CATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTATCCGTTGAATCCCATACAAGTGATAGACCCAAT > NC_000913/1528923‑1529481 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |