breseq  version 0.35.4  revision f352f80f4bc9 mutation predictions | marginal predictions | summary statistics | genome diff | command line log

Marginal new junction evidence (sorted from low to high skew)
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3927418 =	104 (0.920)	4 (0.040)	4/456	NT	4.0%	coding (264/993 nt)	asnA	asparagine synthetase A
	?	NC_000913	3927457 =	93 (0.860)					coding (303/993 nt)	asnA	asparagine synthetase A
*	?	NC_000913	3736656 =	182 (1.600)	4 (0.040)	4/460	NT	2.2%	coding (522/825 nt)	bax	putative glycoside hydrolase Bax
	?	NC_000913	= 3736652	180 (1.650)					coding (526/825 nt)	bax	putative glycoside hydrolase Bax
*	?	NC_000913	= 3528616	127 (1.120)	3 (0.030)	3/464	NT	2.3%	intergenic (+12/‑53)	igaA/yrfG	inner membrane protein ‑ inhibits the Rcs signaling pathway/purine nucleotidase
	?	NC_000913	= 3528635	136 (1.240)					intergenic (+31/‑34)	igaA/yrfG	inner membrane protein ‑ inhibits the Rcs signaling pathway/purine nucleotidase
*	?	NC_000913	3515982 =	136 (1.200)	6 (0.050)	6/462	NT	4.8%	intergenic (‑69/+38)	dam/damX	DNA adenine methyltransferase/cell division protein DamX
	?	NC_000913	3516010 =	107 (0.980)					intergenic (‑97/+10)	dam/damX	DNA adenine methyltransferase/cell division protein DamX
*	?	NC_000913	= 268038	93 (0.820)	4 (0.040) +GAA	4/474	NT	4.2%	intergenic (‑33/+59)	yafZ/ykfA	CP4‑6 prophage; conserved protein YafZ/CP4‑6 prophage; putative GTP‑binding protein YkfA
	?	NC_000913	2768602 =	94 (0.830)					intergenic (+29/‑63)	yfjP/yfjQ	CP4‑57 prophage; putative GTP‑binding protein YfjP/CP4‑57 prophage; protein YfjQ
*	?	NC_000913	= 245723	113 (0.990)	3 (0.030)	3/478	NT	2.6%	coding (83/741 nt)	yafK	L,D‑transpeptidase domain‑containing protein YafK
	?	NC_000913	245727 =	110 (0.970)					coding (79/741 nt)	yafK	L,D‑transpeptidase domain‑containing protein YafK