New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4405038180 (1.210)4 (0.030) 4/500 13.5 2.2% coding (352/1299 nt) purA adenylosuccinate synthetase
?NC_000913 = 4405046 179 (1.230)coding (360/1299 nt) purA adenylosuccinate synthetase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TCGATCTTCTGACTGAACGGGCTAAATATGTTGTACGCTACCAGGGCGGTCACAACGCAGGCCATACTCTCGTAATCAACGGTGAAAAAACCGTTCTCCATCTTATTCCATCAGGTATTCTCCGCGAGAATGTAACCAGCATCATCGGTAACGGTGTTGTGCTGTCTCCGGCCGCGCTGATGAAAGAGATGAAAGAACTGGAAGACCGTGGCATCCCCGTTCGTGAGCGTCTGCTGCTGTCTGAAGCATGTCCGCTGATCCTTGATTATCACGTTGCGCTGGATAACGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4404748‑4405038
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgcgcTTTCTCACGCGCGTTATCCAGCGCAACGTGATAATCAAGGATCAGCGGACATGCTTCAGACAGCAGCAGACGCTCACGAACGGGGATGCCACGGTCTTCCAGTTCTTTCATCTCTTTCATCAGCGCGGCCGGAGACAGCACAACACCGTTACCGATGATGCTGGTTACATTCTCGCGGAGAATACCTGATGGAATAAGATGGAGAACGGTTTTTTCACCGTTGATTACGAGAGTATGGCCTGCGTTGTGACCGCCCTGGTAGCGTACAACATATTTAGCCCGT  <  NC_000913/4405046‑4404764
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
TCGATCTTCTGACTGAACGGGCTAAATATGTTGTACGCTACCAGGGCGGTCACAACGCAGGCCATACTCTCGTAATCAACGGTGAAAAAACCGTTCTCCATCTTATTCCATCAGGTATTCTCCGCGAGAATGTAACCAGCATCATCGGTAACGGTGTTGTGCTGTCTCCGGCCGCGCTGATGAAAGAGATGAAAGAACTGGAAGACCGTGGCATCCCCGTTCGTGAGCGTCTGCTGCTGTCTGAAGCATGTCGGCTGATCCTTGCTTATCACGTTACGCTGGCTAATGC                                                                                                                                                                                                                                                                                               >  2:970081/1‑289
      TTCTGACTGAACGGGCTAAATATGTTGTACGCTACCAGGGCGGTCACAACGCAGGCCATACTCTCGTAATCAACGGTGAAAAAACCGTTCTCCATCTTATTCCATCAGGTATTCTCCGCGAGAATGTAACCAGCATCATCGGTAACGGTGTTGTGCTGTCTCCGGCCGCGCTGATGAAAGAGATGAAAGAACTGGAAGACCGTGGCATCCCCGTTCGTGAGCGTCTGCTGCTGTCTGAAGCATGTCCGCTGATCCTTGATTATCACGTTGCGCTGGATAACGCGCgcga                                                                                                                                                                                                                                                                                         >  1:703446/1‑285
                                                                                                                                                                                                                                              GTCTGAAGCATGTCCGCTGATCCTTGATTATCACGTTGCGCTGGATAACGCGCTTTCTCACGCGCGTTATCCAGCGCAACGTGATAATCAAGGATCAGCGGACATGCTTCAGACAGCAGCAGACGCTCACGAACGGGGATGCCACGGTCTTCCAGTTCTTTCATCTCTTTCATCAGCGCGGCC                                                                                                                                                           >  1:1225054/1‑183
                                                                                                                                                                                                                                              GTCTGAAGCATGTCCGCTGATCCTTGATTATCACGTTGCGCTGGATAACGCGCTTTCTCACGCGCGTTATCCAGCGCAACGTGATAATCAAGGATCAGCGGACATGCTTCAGACAGCAGCAGACGCTCACGAACGGGGATGCCACGGTCTTCCAGTTCTTTCATCTCTTTCATCAGCGCGGCC                                                                                                                                                           <  2:1225054/183‑1
                                                                                                                                                                                                                                                                             CACGTTGCGCTGGATAACGCGCTTTCTCACGCGCGTTATCCAGCGCAACGTGATAATCAAGGATCAGCGGACATGCTTCAGACAGCAGCAGACGCTCACGAA                                                                                                                                                                                                             <  1:1265420/102‑1
                                                                                                                                                                                                                                                                             CACGTTGCGCTGGATAACGCGCTTTCTCACGCGCGTTATCCAGCGCAACGTGATAATCAAGGATCAGCGGACATGCTTCAGACAGCAGCAGACGCTCACGAA                                                                                                                                                                                                             >  2:1265420/1‑102
                                                                                                                                                                                                                                                                                             ACGCGCTTTCACGCGCGCGTTATCCAGCGGAACGTGATAATCAAGGATCAGCGGACATGCTTCAGACAGCAGCAGACGCTCACGAACGGGGATGCCACGGTCTTCCAGTTCTTGCATCTCTTTCATCAGCGCGGTCGGAGACAGCACAACACCGTTACCGATGATGCTGGTTGCATTCTCGCGGAGAATACCTGATGGAATAAGATGGAGAACGGTTTTTTCACCGTTGATTACGAGAGTATGGCCTGCGTTGTGACCGCCCTGGTAGCGTACAACATATTTAGCCCGT  <  2:187183/289‑1
                                                                                                                                                                                                                                                                                              CGCGCTTTCTCACGCGCGTTATCCAGCGCAACGTGATAATCAAGGATCAGCGGACATGCTTCAGACAGCAGCAGACGCTCACGAACGGGGATGCCACGGTCTTCCAGTTCTTTCATCTCTTTCATCAGCGCGGCCGGAGACAGCACAACACCGTTACCGATGATGCTGGTTACATTCTCGCGGAGAATACCTGATGGAATAAGATGGAGAACGGTTTTTTCACCGTTGATTACGAGAGTATGGCCTGCG                                         >  1:251348/1‑249
                                                                                                                                                                                                                                                                                              CGCGCTTTCTCACGCGCGTTATCCAGCGCAACGTGATAATCAAGGATCAGCGGACATGCTTCAGACAGCAGCAGACGCTCACGAACGGGGATGCCACGGTCTTCCAGTTCTTTCATCTCTTTCATCAGCGCGGCCGGAGACAGCACAACACCGTTACCGATGATGCTGGTTACATTCTCGCGGA                                                                                                          >  1:347998/1‑184
                                                                                                                                                                                                                                                                                              CGCGCTTTCTCACGCGCGTTATCCAGCGCAACGTGATAATCAAGGATCAGCGGACATGCTTCAGACAGCAGCAGACGCTCACGAACGGGGATGCCACGGTCTTCCAGTTCTTTCATCTCTTTCATCAGCGCGGCCGGAGACAGCACAACACCGTTACCGATGATGCTGGTTACATTCTCGCGGA                                                                                                          <  2:347998/184‑1
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
TCGATCTTCTGACTGAACGGGCTAAATATGTTGTACGCTACCAGGGCGGTCACAACGCAGGCCATACTCTCGTAATCAACGGTGAAAAAACCGTTCTCCATCTTATTCCATCAGGTATTCTCCGCGAGAATGTAACCAGCATCATCGGTAACGGTGTTGTGCTGTCTCCGGCCGCGCTGATGAAAGAGATGAAAGAACTGGAAGACCGTGGCATCCCCGTTCGTGAGCGTCTGCTGCTGTCTGAAGCATGTCCGCTGATCCTTGATTATCACGTTGCGCTGGATAACGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4404748‑4405038
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgcgcTTTCTCACGCGCGTTATCCAGCGCAACGTGATAATCAAGGATCAGCGGACATGCTTCAGACAGCAGCAGACGCTCACGAACGGGGATGCCACGGTCTTCCAGTTCTTTCATCTCTTTCATCAGCGCGGCCGGAGACAGCACAACACCGTTACCGATGATGCTGGTTACATTCTCGCGGAGAATACCTGATGGAATAAGATGGAGAACGGTTTTTTCACCGTTGATTACGAGAGTATGGCCTGCGTTGTGACCGCCCTGGTAGCGTACAACATATTTAGCCCGT  <  NC_000913/4405046‑4404764

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.